Evidence map›Paper›PMID 36609752›Full record

ArticleMolecular biology reports2023

The first complete mitochondrial genome sequences for Ulidiidae and phylogenetic analysis of Diptera.

Kun Xing, Chen Kang, Fei Zhao

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Article in Molecular biology reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 35% of its field
1 · What the graph read from it

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3 · Its place in the literature

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4 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Kun Xing *College of Plant Protection, Shanxi Agricultural University, 030031, Taiyuan, China.
Chen Kang *College of Plant Protection, Shanxi Agricultural University, 030031, Taiyuan, China.
Fei ZhaoCollege of Plant Protection, Shanxi Agricultural University, 030031, Taiyuan, China. zhaofei12@126.com.
Shanxi Agricultural University · CN

Funding

Key Laboratory of Highway Construction and Maintenance Technology in the Loess Region of Shanxi Transportation Research Institute 201903D221014the Foundation of Shanxi Academy of Agricultural Sciences YCX2018D2T02
6 · The paper itself

Abstract

backgroundTetanops sintenisi is a pest that mainly damages the root of quinoa (Chenopodium quinoa) and it is first discovered in China in 2018. METHODS AND

resultsHere, the complete mitochondrial genome (mitogenome) of T. sintenisi was sequenced and compared with the mitogenomes of other Diptera species. The results revealed that the mitogenome of T. sintenisi is 15,763 bp in length (GenBank accession number: MT795181) and is comprised of 13 protein-coding genes (PCGs), 22 transfer RNA (tRNA) genes, 2 ribosomal RNA genes, and a non-coding A + T-rich region (959 bp). The highly conserved gene arrangement of the mitogenome of T. sintenisi was identical to that of other Diptera insects. Twelve PCGs contained the typical insect start codon ATN, while cox1 had CGA as the start codon. The genes cox2, nad4, and nad1 contained an incomplete termination codon T; nad3, nad5, and cob contained the complete termination codon TAG; and the remaining seven PCGs contained the termination codon TAA. All tRNA genes were predicted to fold into the typical cloverleaf secondary structure. Phylogenetic analysis of 48 species based on the mitogenome sequence revealed that T. sintenisi clustered with the Tephritidae family, indicating that T. sintenisi and Tephritidae have a close phylogenetic relationship.

conclusionsThe phylogenetic relationship of T. sintenisi based on the mitogenome is consistent with the traditional morphological taxonomy, according to which T. sintenisi belongs to the family Otitidae, which is closely related to the family Muscidae.

Indexed as

Genome, MitochondrialTephritidaeAnimalsCodon, InitiatorCodon, TerminatorPhylogenyRNA, TransferCodon, InitiatorCodon, TerminatorRNA, TransferDipteraDiptera phylogeneticsMitochondrial genomeTetanops sintenisiUlidiidae

Identifiers

PMID36609752
OpenAlexW4313644695

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.