Evidence map›Paper›PMID 36609379›Full record

ArticleBMC medical informatics and decision making2023

Predicting decompression surgery by applying multimodal deep learning to patients' structured and unstructured health data.

Chethan Jujjavarapu, Pradeep Suri, Vikas Pejaver, Janna Friedly, Laura S Gold, Eric Meier, Trevor Cohen, Sean D Mooney, Patrick J Heagerty, Jeffrey G Jarvik

Open access · goldAbstract read
In one paragraph

Article in BMC medical informatics and decision making, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Development and external validation of a predictive model for prolonged length of hospital stay in elderly patients undergoing lumbar fusion surgery: comparison of three predictive models.European spine journal : official publication of the European Spine Society, the European Spinal Deformity Society, and the European Section of the Cervical Spine Research Society · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Chethan JujjavarapuDepartment of Biomedical Informatics and Medical Education, School of Medicine, University of Washington, Box 358047, Seattle, WA, 98195, USA.
Pradeep SuriClinical Learning, Evidence and Research Center, University of Washington, 4333 Brooklyn Ave NE, Seattle, WA, 98105, USA.
Vikas PejaverInstitute for Genomic Health, Icahn School of Medicine at Mount Sinai, New York, NY, 10029, USA.
Janna FriedlyClinical Learning, Evidence and Research Center, University of Washington, 4333 Brooklyn Ave NE, Seattle, WA, 98105, USA.
Laura S GoldClinical Learning, Evidence and Research Center, University of Washington, 4333 Brooklyn Ave NE, Seattle, WA, 98105, USA.
Eric MeierClinical Learning, Evidence and Research Center, University of Washington, 4333 Brooklyn Ave NE, Seattle, WA, 98105, USA.
Trevor CohenDepartment of Biomedical Informatics and Medical Education, School of Medicine, University of Washington, Box 358047, Seattle, WA, 98195, USA.
Sean D MooneyDepartment of Biomedical Informatics and Medical Education, School of Medicine, University of Washington, Box 358047, Seattle, WA, 98195, USA.
Patrick J HeagertyDepartment of Biostatistics, University of Washington, Box 357232, Seattle, WA, 98195-7232, USA.
Jeffrey G JarvikClinical Learning, Evidence and Research Center, University of Washington, 4333 Brooklyn Ave NE, Seattle, WA, 98105, USA. jarvikj@uw.edu.
University of Washington · USGenomic Health (United States) · US

Funding

Transform Dissemination and Implementation Science in CTSA ProgramsUL1TR002319 · NCATS · UNIVERSITY OF WASHINGTON · PI John K. Amory · 2017 to 2026
$100.0M
NIH Health Care Systems Research Collaboratory-Coordinating Center (U24)U24AT009676 · NCCIH · DUKE UNIVERSITY · PI LESLEY H CURTIS, Adrian Hernandez · 2017 to 2026
$21.5M
UW Core Center for Clinical Research of Musculoskeletal ConditionsP30AR072572 · NIAMS · UNIVERSITY OF WASHINGTON · PI JEFFREY G JARVIK · 2017 to 2026
$8.3M
A Pragmatic Trial of Lumbar Image Reporting with Epidemiology (LIRE)UH3AR066795 · NIAMS · UNIVERSITY OF WASHINGTON · PI JARVIK, JEFFREY G · 2014 to 2017
$6.0M
A Pragmatic Trial of Lumbar Image Reporting with Epidemiology (LIRE)UH2AT007766 · NCCIH · UNIVERSITY OF WASHINGTON · PI JARVIK, JEFFREY G · 2012 to 2012
$838k
CHRONIC HEPATITIS: BUILDING A MODEL FOR PREVENTIONF31NR006679 · NINR · RUSH UNIVERSITY · PI SUTHERLAND, KAREN A · 1991 to 1995
–
NCATS NIH HHS UL1 TR002319NCCIH NIH HHS U24 AT009676NCCIH NIH HHS UH2 AT007766NIAMS NIH HHS P30 AR072572NIAMS NIH HHS UH3 AR066795NINR NIH HHS 5UH3AR06679
6 · The paper itself

Abstract

backgroundLow back pain (LBP) is a common condition made up of a variety of anatomic and clinical subtypes. Lumbar disc herniation (LDH) and lumbar spinal stenosis (LSS) are two subtypes highly associated with LBP. Patients with LDH/LSS are often started with non-surgical treatments and if those are not effective then go on to have decompression surgery. However, recommendation of surgery is complicated as the outcome may depend on the patient's health characteristics. We developed a deep learning (DL) model to predict decompression surgery for patients with LDH/LSS. MATERIALS AND

methodWe used datasets of 8387 and 8620 patients from a prospective study that collected data from four healthcare systems to predict early (within 2 months) and late surgery (within 12 months after a 2 month gap), respectively. We developed a DL model to use patients' demographics, diagnosis and procedure codes, drug names, and diagnostic imaging reports to predict surgery. For each prediction task, we evaluated the model's performance using classical and generalizability evaluation. For classical evaluation, we split the data into training (80%) and testing (20%). For generalizability evaluation, we split the data based on the healthcare system. We used the area under the curve (AUC) to assess performance for each evaluation. We compared results to a benchmark model (i.e. LASSO logistic regression).

resultsFor classical performance, the DL model outperformed the benchmark model for early surgery with an AUC of 0.725 compared to 0.597. For late surgery, the DL model outperformed the benchmark model with an AUC of 0.655 compared to 0.635. For generalizability performance, the DL model outperformed the benchmark model for early surgery. For late surgery, the benchmark model outperformed the DL model.

conclusionsFor early surgery, the DL model was preferred for classical and generalizability evaluation. However, for late surgery, the benchmark and DL model had comparable performance. Depending on the prediction task, the balance of performance may shift between DL and a conventional ML method. As a result, thorough assessment is needed to quantify the value of DL, a relatively computationally expensive, time-consuming and less interpretable method.

Indexed as

Deep LearningIntervertebral Disc DisplacementLow Back PainSpinal StenosisDecompression, SurgicalHumansLumbar VertebraeProspective StudiesRetrospective StudiesTreatment OutcomeClassificationDecompression surgeryDeep learningGeneralizabilityLower back painLumbar disc herniationLumbar spinal stenosisMachine learningMultimodalPrediction

Identifiers

PMID36609379
PMCPMC9824905
OpenAlexW4313645227

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.