Evidence map›Paper›PMID 36607623›Full record

ArticleTranslational vision science & technology2023

Deep Convolutional Neural Networks Detect no Morphological Differences Between Culture-Positive and Culture-Negative Infectious Keratitis Images.

Kaitlin Kogachi, Prajna Lalitha, N Venkatesh Prajna, Rameshkumar Gunasekaran, Jeremy D Keenan, J Peter Campbell, Xubo Song, Travis K Redd

Open access · goldAbstract readComparative Study
In one paragraph

Article in Translational vision science & technology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Kaitlin KogachiCasey Eye Institute, Oregon Health & Science University, Portland, OR, USA.
Prajna LalithaAravind Eye Hospital, Madurai, Tamil Nadu, India.
N Venkatesh PrajnaAravind Eye Hospital, Madurai, Tamil Nadu, India.
Rameshkumar GunasekaranAravind Eye Hospital, Madurai, Tamil Nadu, India.
Jeremy D KeenanFrancis I. Proctor Foundation, University of California San Francisco, San Francisco, CA, USA.
J Peter CampbellCasey Eye Institute, Oregon Health & Science University, Portland, OR, USA.
Xubo SongDepartment of Medical Informatics and Clinical Epidemiology and Program of Computer Science and Electrical Engineering, Oregon Health & Science University, Portland, OR, USA.
Travis K ReddCasey Eye Institute, Oregon Health & Science University, Portland, OR, USA.
Oregon Health & Science University · USAravind Eye Hospital · INUniversity of California, San Francisco · US

Funding

Proteomics CoreP30EY010572 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI John Peter Campbell · 1995 to 2026
$19.4M
Mentored Vision Clinician-Scientist Program at OHSUK12EY027720 · NEI · OREGON HEALTH & SCIENCE UNIVERSITY · PI David Huang · 2018 to 2026
$2.2M
Applications of artificial intelligence to the diagnostic evaluation of infectious keratitisK23EY032639 · NEI · UNIVERSITY OF COLORADO DENVER · PI Travis Kenneth Redd · 2022 to 2026
$1.3M
NEI NIH HHS K12 EY027720NEI NIH HHS K23 EY032639NEI NIH HHS P30 EY010572
6 · The paper itself

Abstract

Purpose: To determine whether convolutional neural networks can detect morphological differences between images of microbiologically positive and negative corneal ulcers. Methods: A cross-sectional comparison of prospectively collected data consisting of bacterial and fungal cultures and smears from eyes with acute infectious keratitis at Aravind Eye Hospital. Two convolutional neural network architectures (DenseNet and MobileNet) were trained using images obtained from handheld cameras collected from culture-positive and negative images and smear-positive and -negative images. Each architecture was trained on two image sets: (1) one with labels assigned using only culture results and (2) one using culture and smear results. The outcome measure was area under the receiver operating characteristic curve for predicting whether an ulcer would be microbiologically positive or negative. Results: There were 1970 images from 886 patients were included. None of the models were better than random chance at predicting positive microbiologic results (area under the receiver operating characteristic curve ranged from 0.49 to 0.56; all confidence intervals included 0.5). Conclusions: These two state-of-the-art deep convolutional neural network architectures could not reliably predict whether a corneal ulcer would be microbiologically positive or negative based on clinical photographs. This absence of detectable morphological differences informs the future development of computer vision models trained to predict the causative agent in infectious keratitis using corneal photography. Translational Relevance: These deep learning models were not able to identify morphological differences between microbiologically positive and negative corneal ulcers. This finding suggests that similar artificial intelligence models trained to identify the causative pathogen using only microbiologically positive cases may have potential to generalize well, including to cases with falsely negative microbiologic testing.

Indexed as

Artificial IntelligenceKeratitisCross-Sectional StudiesHumansNeural Networks, ComputerUlcer

Identifiers

PMID36607623
PMCPMC9836011
OpenAlexW4313650473

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.