Evidence map›Paper›PMID 36607129›Full record

ReviewAnnals of clinical and translational neurology2023

Clinical and genetic characterization of NIPA1 mutations in a Taiwanese cohort with hereditary spastic paraplegia.

Shih-Yu Fang, Ying-Tsen Chou, Kuo-Chou Hsu, Shao-Lun Hsu, Kai-Wei Yu, Yu-Shuen Tsai, Yi-Chu Liao, Pei-Chien Tsai, Yi-Chung Lee

Open access · goldAbstract readReview
In one paragraph

Review in Annals of clinical and translational neurology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.2field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Shih-Yu FangDepartment of Neurology, Taipei Veterans General Hospital, Taipei, Taiwan.
Ying-Tsen ChouDepartment of Neurology, Taipei Veterans General Hospital, Taipei, Taiwan.
Kuo-Chou HsuDepartment of Medicine, Taipei Veterans General Hospital Yuanshan Branch, Yuanshan, Taiwan.
Shao-Lun HsuDepartment of Neurology, Taipei Veterans General Hospital, Taipei, Taiwan.
Kai-Wei YuDepartment of Radiology, Taipei Veterans General Hospital, Taipei, Taiwan.
Yu-Shuen TsaiCenter for Systems and Synthetic Biology, National Yang Ming Chiao Tung University, Taipei, Taiwan.
Yi-Chu LiaoDepartment of Neurology, Taipei Veterans General Hospital, Taipei, Taiwan.ORCID 0000-0002-9644-2086
Pei-Chien TsaiDepartment of Life Sciences, National Chung Hsing University, Taichung, Taiwan.
Yi-Chung LeeDepartment of Neurology, Taipei Veterans General Hospital, Taipei, Taiwan.ORCID 0000-0003-0102-164X
National Yang Ming Chiao Tung University · TWTaipei Veterans General Hospital · TWNational Chung Hsing University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

objectiveNIPA1 mutations have been implicated in hereditary spastic paraplegia (HSP) as the cause of spastic paraplegia type 6 (SPG6). The aim of this study was to investigate the clinical and genetic features of SPG6 in a Taiwanese HSP cohort.

methodsWe screened 242 unrelated Taiwanese patients with HSP for NIPA1 mutations. The clinical features of patients with a NIPA1 mutation were analyzed. Minigene-based splicing assay, RT-PCR analysis on the patients' RNA, and cell-based protein expression study were utilized to assess the effects of the mutations on splicing and protein expression.

resultsTwo patients were identified to carry a different heterozygous NIPA1 mutation. The two mutations, c.316G>A and c.316G>C, are located in the 3' end of NIPA1 exon 3 near the exon-intron boundary and putatively lead to the same amino acid substitution, p.G106R. The patient harboring NIPA1 c.316G>A manifested spastic paraplegia, epilepsy and schizophrenia since age 17 years, whereas the individual carrying NIPA1 c.316G>C had pure HSP since age 12 years. We reviewed literature and found that epilepsy was present in multiple individuals with NIPA1 c.316G>A but none with NIPA1 c.316G>C. Functional studies demonstrated that both mutations did not affect splicing, but only the c.316G>A mutation was associated with a significantly reduced NIPA1 protein expression.

interpretationSPG6 accounted for 0.8% of HSP cases in the Taiwanese cohort. The NIPA1 c.316G>A and c.316G>C mutations are associated with adolescent-onset complex and pure form HSP, respectively. The different effects on protein expression of the two mutations may be associated with their phenotypic discrepancy.

Indexed as

EpilepsySpastic Paraplegia, HereditaryAdolescentChildHumansMembrane ProteinsMutationParaplegiaMembrane ProteinsNIPA1 protein, human

Identifiers

PMID36607129
PMCPMC10014004
OpenAlexW4313595858

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.