Evidence map›Paper›PMID 36605753›Full record

ArticleChemical science2022

Electronic, redox, and optical property prediction of organic π-conjugated molecules through a hierarchy of machine learning approaches.

Vinayak Bhat, Parker Sornberger, Balaji Sesha Sarath Pokuri, Rebekah Duke, Baskar Ganapathysubramanian, Chad Risko

Abstract read
In one paragraph

Article in Chemical science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
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  7. On the importance of crystal structures for organic thin film transistors.Acta crystallographica. Section C, Structural chemistry · 2024
    Article
  8. AI-Powered Mining of Highly Customized and Superior ESIPT-Based Fluorescent Probes.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2024
    Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Vinayak BhatDepartment of Chemistry and Center for Applied Energy Research, University of Kentucky Lexington Kentucky 40506 USA chad.risko@uky.edu baskarg@iastate.edu.ORCID https://orcid.org/0000-0003-0736-3499
Parker SornbergerDepartment of Chemistry and Center for Applied Energy Research, University of Kentucky Lexington Kentucky 40506 USA chad.risko@uky.edu baskarg@iastate.edu.ORCID https://orcid.org/0000-0001-8816-8243
Balaji Sesha Sarath PokuriDepartment of Mechanical Engineering and Translational AI Center, Iowa State University Ames Iowa 50010 USA.ORCID https://orcid.org/0000-0002-5816-0184
Rebekah DukeDepartment of Chemistry and Center for Applied Energy Research, University of Kentucky Lexington Kentucky 40506 USA chad.risko@uky.edu baskarg@iastate.edu.ORCID https://orcid.org/0000-0002-2659-552X
Baskar GanapathysubramanianDepartment of Mechanical Engineering and Translational AI Center, Iowa State University Ames Iowa 50010 USA.ORCID https://orcid.org/0000-0002-8931-4852
Chad RiskoDepartment of Chemistry and Center for Applied Energy Research, University of Kentucky Lexington Kentucky 40506 USA chad.risko@uky.edu baskarg@iastate.edu.ORCID https://orcid.org/0000-0001-9838-5233

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Accelerating the development of π-conjugated molecules for applications such as energy generation and storage, catalysis, sensing, pharmaceuticals, and (semi)conducting technologies requires rapid and accurate evaluation of the electronic, redox, or optical properties. While high-throughput computational screening has proven to be a tremendous aid in this regard, machine learning (ML) and other data-driven methods can further enable orders of magnitude reduction in time while at the same time providing dramatic increases in the chemical space that is explored. However, the lack of benchmark datasets containing the electronic, redox, and optical properties that characterize the diverse, known chemical space of organic π-conjugated molecules limits ML model development. Here, we present a curated dataset containing 25k molecules with density functional theory (DFT) and time-dependent DFT (TDDFT) evaluated properties that include frontier molecular orbitals, ionization energies, relaxation energies, and low-lying optical excitation energies. Using the dataset, we train a hierarchy of ML models, ranging from classical models such as ridge regression to sophisticated graph neural networks, with molecular SMILES representation as input. We observe that graph neural networks augmented with contextual information allow for significantly better predictions across a wide array of properties. Our best-performing models also provide an uncertainty quantification for the predictions. To democratize access to the data and trained models, an interactive web platform has been developed and deployed.

Identifiers

PMID36605753
PMCPMC9769113

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.