Evidence map›Paper›PMID 36604730›Full record

ArticleBMC medical genomics2023

Early contribution of germline and nevi genetic alterations to a rapidly-progressing cutaneous melanoma patient: a case report.

Ana Mordoh, Juan Carlos Triviño Pardo, Ibel Carri, María Marcela Barrio, José Mordoh, Mariana Aris

Open access · goldAbstract readCase Reports
In one paragraph

Article in BMC medical genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.9field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 2 countries.

Ana MordohHospital de Clínicas, Buenos Aires, Argentina.
Juan Carlos Triviño PardoSistemas Genómicos Grupo Biomédico ASCIRES, Valencia, Spain.
Ibel CarriInstituto de Investigaciones Biotecnológicas, Universidad Nacional de San Martín, Buenos Aires, Argentina.
María Marcela BarrioCentro de Investigaciones Oncológicas-Fundación Cáncer, Buenos Aires, Argentina.
José MordohCentro de Investigaciones Oncológicas-Fundación Cáncer, Buenos Aires, Argentina.
Mariana ArisCentro de Investigaciones Oncológicas-Fundación Cáncer, Buenos Aires, Argentina. mariana.aris@conicet.gov.ar.ORCID 0000-0002-9404-5845
Fundación para la Investigación, Docencia y Prevención del Cáncer · ARConsejo Nacional de Investigaciones Científicas y Técnicas · ARHospital de Clínicas "José de San Martín" · ARNational University of General San Martín · ARSistemas Genómicos · ES

Funding

Instituto Nacional del Cáncer INC IIIInstituto Nacional del Cáncer IS001946
6 · The paper itself

Abstract

backgroundCutaneous melanoma is the skin cancer with the highest mutational burden and metastatic rate. Early genetic alterations and biomarkers of distant progression are a point of interest. In addition to germline-susceptibility loci, almost 30% of melanomas arise from precursor benign nevi lesions, providing a source for malignant transformation. CASE PRESENTATION: Patient#009 developed a cutaneous melanoma over a nevus, followed by progression to regional and distant metastases in months, unresponsive to targeted therapy. To search for the genetic contribution to this rapid progression, a longitudinal analysis was performed through WES of germline, nevi, primary tumor, and a metastatic lymph node. Differential SNP/INDEL and CNV gene alterations, with functional impact on key pathways and cancer hallmarks in each step of evolution, were discerned. Tumor-associated nevus was, for the first time, split into two sections, distant and adjacent to the primary tumor, to study its heterogeneity. Shared SNP alterations, with stable allele fraction from germline to metastasis were detected, mainly affecting DNA repair genes and promoting genome instability. Early somatic alterations, shared by nevi and primary and metastatic tumors, included BRAF

conclusionsIn this patient, longitudinal WES analysis revealed a sequential and cumulative pattern of genetic alterations, where germline and nevi somatic events contributed early to its rapid clinical progression. In this case report, we found tumor-associated nevi as genetically heterogeneous precursor entities, in which potential prognostic biomarkers should be studied prospectively.

Indexed as

MelanomaNevusSkin NeoplasmsCell Transformation, NeoplasticCutaneous Malignant MelanomaHumansPhylogenyProto-Oncogene Proteins B-rafProto-Oncogene Proteins B-rafCancer hallmarksCancer pathwaysCase reportCutaneous melanomaGermline alterationsNevi heterogeneitySomatic alterationsTumor progressionWhole-exome sequencing

Identifiers

PMID36604730
PMCPMC9814418
OpenAlexW4313574193

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.