Evidence map›Paper›PMID 36602677›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2023

Using Budding Yeast as a Model to Understand Dynein-Mediated Cargo Transport.

Kari H Ecklund, Matthew G Marzo, Steven M Markus

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kari H EcklundDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Matthew G MarzoDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA.
Steven M MarkusDepartment of Biochemistry and Molecular Biology, Colorado State University, Fort Collins, CO, USA. steven.markus@colostate.edu.

Funding

Regulation of Dynein-Mediated Transport.R35GM139483 · NIGMS · COLORADO STATE UNIVERSITY · PI Steven M Markus · 2021 to 2026
$2.9M
NIGMS NIH HHS R35 GM139483
6 · The paper itself

Abstract

Cytoplasmic dynein-1 is a minus end-directed microtubule motor that transports numerous cargoes in cell types throughout the evolutionary spectrum. Dynein is regulated by various motor-intrinsic and motor-extrinsic factors that enhance its processivity, recruit it to various cellular sites, or otherwise promote or restrict its activity. Studying dynein activity in higher eukaryotes is complicated by various factors, including the myriad functions in which this motor participates, and the consequential pleotropic effects associated with disrupting its activity. Budding yeast has long been a powerful model system for understanding this enormous motor protein complex, which is highly conserved between yeast and humans at the primary sequence and structural levels. Studies in budding yeast are simplified by the fact that dynein only performs one known function in this organism: to position the mitotic spindle at the site of cell division. Monitoring dynein-mediated spindle movements in budding yeast provides a powerful tool for the quantitative measurements of various motility parameters, and a system with which to assess the consequence of mutations in dynein or its regulators. Here, we provide detailed protocols to perform quantitative measurements of dynein activity in live cells using a combination of fluorescence microscopy and computational methods to track and quantitate dynein-mediated spindle movements. These methods are broadly applicable to anyone that wishes to perform fluorescence microscopy on budding yeast.

Indexed as

DyneinsSaccharomycetalesHumansMicrotubulesSaccharomyces cerevisiaeSpindle ApparatusDyneinsDyneinLive-cell imagingYeast transformation, Nuclear migration, Spindle positioning

Identifiers

PMID36602677
PMCPMC10132083

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.