Evidence map›Paper›PMID 36602225›Full record

ArticleAnalytical chemistry2023

A Complete Pipeline for Untargeted Urinary Volatolomic Profiling with Sorptive Extraction and Dual Polar and Nonpolar Column Methodologies Coupled with Gas Chromatography Time-of-Flight Mass Spectrometry.

Qing Wen, Antonis Myridakis, Piers R Boshier, Simone Zuffa, Ilaria Belluomo, Aaron G Parker, Sung-Tong Chin, Stephanie Hakim, Sheraz R Markar, George B Hanna

Abstract read
In one paragraph

Article in Analytical chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Qing WenDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.ORCID 0000-0002-6441-3627
Antonis MyridakisDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.ORCID 0000-0003-1690-6651
Piers R BoshierDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.
Simone ZuffaDepartment of Metabolism, Digestion and Reproduction, Imperial College London, London SW7 2AZ, United Kingdom.ORCID 0000-0001-7237-3402
Ilaria BelluomoDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.
Aaron G ParkerDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.
Sung-Tong ChinDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.
Stephanie HakimDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.
Sheraz R MarkarDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.
George B HannaDepartment of Surgery and Cancer, Imperial College London, London W12 0HS, United Kingdom.ORCID 0000-0003-2897-0140

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Volatolomics offers an opportunity for noninvasive detection and monitoring of human disease. While gas chromatography-mass spectrometry (GC-MS) remains the technique of choice for analyzing volatile organic compounds (VOCs), barriers to wider adoption in clinical practice still exist, including: sample preparation and introduction techniques, VOC extraction, throughput, volatolome coverage, biological interpretation, and quality control (QC). Therefore, we developed a complete pipeline for untargeted urinary volatolomic profiling. We optimized a novel extraction technique using HiSorb sorptive extraction, which exhibited high analytical performance and throughput. We achieved a broader VOC coverage by using HiSorb coupled with a set of complementary chromatographic methods and time-of-flight mass spectrometry. Furthermore, we developed a data preprocessing strategy by evaluating internal standard normalization, batch correction, and we adopted strict QC measures including removal of nonlinearly responding, irreproducible, or contaminated metabolic features, ensuring the acquisition of high-quality data. The applicability of this pipeline was evaluated in a clinical cohort consisting of pancreatic ductal adenocarcinoma (PDAC) patients (

Indexed as

Volatile Organic CompoundsBiomarkersGas Chromatography-Mass SpectrometryHumansMass SpectrometryBiomarkersVolatile Organic Compounds

Identifiers

PMID36602225
PMCPMC9850407

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.