Evidence map›Paper›PMID 36601935›Full record

ArticleJournal of synchrotron radiation2023

Automatic synchrotron tomographic alignment schemes based on genetic algorithms and human-in-the-loop software.

Zhen Zhang, Xiaoxue Bi, Pengcheng Li, Chenglong Zhang, Yiming Yang, Yu Liu, Gang Chen, Yuhui Dong, Gongfa Liu, Yi Zhang

Abstract read
In one paragraph

Article in Journal of synchrotron radiation, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Zhen ZhangNational Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, People's Republic of China.
Xiaoxue BiBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
Pengcheng LiBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
Chenglong ZhangBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
Yiming YangBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
Yu LiuBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
Gang ChenBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, People's Republic of China.
Yuhui DongBeijing Synchrotron Radiation Facility, Institute of High Energy Physics, Chinese Academy of Sciences, Beijing 100049, People's Republic of China.ORCID 0000-0002-4422-4685
Gongfa LiuNational Synchrotron Radiation Laboratory, University of Science and Technology of China, Hefei, Anhui 230029, People's Republic of China.
Yi ZhangUniversity of Chinese Academy of Sciences, Beijing 100049, People's Republic of China.

Funding

Chinese Academy of Sciences WX2021PY-0106Chinese Academy of Sciences XDB37000000Chinese Academy of Sciences, Institute of High Energy Physics E25455U210Hefei Science Center, Chinese Academy of Sciences 2019HSC-KPRD003National Science Foundation for Young Scientists of China 12005253
6 · The paper itself

Abstract

Tomography imaging methods at synchrotron light sources keep evolving, pushing multi-modal characterization capabilities at high spatial and temporal resolutions. To achieve this goal, small probe size and multi-dimensional scanning schemes are utilized more often in the beamlines, leading to rising complexities and challenges in the experimental setup process. To avoid spending a significant amount of human effort and beam time on aligning the X-ray probe, sample and detector for data acquisition, most attention has been drawn to realigning the systems at the data processing stages. However, post-processing cannot correct everything, and is not time efficient. Here we present automatic alignment schemes of the rotational axis and sample pre- and during the data acquisition process using a software approach which combines the advantages of genetic algorithms and human intelligence. Our approach shows excellent sub-pixel alignment efficiency for both tasks in a short time, and therefore holds great potential for application in the data acquisition systems of future scanning tomography experiments.

Indexed as

SoftwareSynchrotronsAlgorithmsHumansTomography, X-Ray ComputedX-Rayscomputed tomographygenetic algorithmshuman-in-the-looprotation-axis alignmentsample alignmentscanning tomographyX-ray microscopy

Identifiers

PMID36601935
PMCPMC9814067

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.