Evidence map›Paper›PMID 36601300›Full record

ArticleVirus evolution2022

Discovering recent selection forces shaping the evolution of dengue viruses based on polymorphism data across geographic scales.

Nien-Kung Li, Jukka Corander, Yonatan H Grad, Hsiao-Han Chang

Abstract read
In one paragraph

Article in Virus evolution, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nien-Kung LiDepartment of Life Science & Institute of Bioinformatics and Structural Biology, National Tsing Hua University, 101, Section 2, Kuang-Fu Road, Hsinchu 300044, Taiwan.
Jukka CoranderHelsinki Institute for Information Technology, Department of Mathematics and Statistics, University of Helsinki, Yliopistonkatu 3, Helsinki 00014, Finland.
Yonatan H GradDepartment of Immunology and Infectious Diseases and Center for Communicable Disease Dynamics, Harvard T. H. Chan School of Public Health, 677 Huntington Ave, Boston, Massachusetts 02115, USA.ORCID https://orcid.org/0000-0001-5646-1314

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Incomplete selection makes it challenging to infer selection on genes at short time scales, especially for microorganisms, due to stronger linkage between loci. However, in many cases, the selective force changes with environment, time, or other factors, and it is of great interest to understand selective forces at this level to answer relevant biological questions. We developed a new method that uses the change in

Indexed as

dengue virusdn/dsgeographic scalesnatural selectionpMK test

Identifiers

PMID36601300
PMCPMC9789396

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.