Evidence map›Paper›PMID 36600466›Full record

ArticleMolecular plant pathology2023

Natural variation in the hrpL promoter renders the phytopathogen Pseudomonas syringae pv. actinidiae nonpathogenic.

Ting Xie, Xiujiao Wu, Le Luo, Yuan Qu, Rong Fan, Shiping Wu, Youhua Long, Zhibo Zhao

Open access · goldAbstract read
In one paragraph

Article in Molecular plant pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
6.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Horticulture research · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Ting XieDepartment of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, China.
Xiujiao WuDepartment of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, China.
Le LuoDepartment of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, China.
Yuan QuDepartment of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, China.
Rong FanKiwifruit Engineering & Technology Research Center, Guizhou University, Guiyang, China.
Shiping WuInstitute of Plant Protection, Guizhou Academy of Agricultural Sciences, Guiyang, China.
Youhua LongKiwifruit Engineering & Technology Research Center, Guizhou University, Guiyang, China.
Zhibo ZhaoDepartment of Plant Pathology, College of Agriculture, Guizhou University, Guiyang, China.ORCID 0000-0001-5043-1384
Guizhou University · CNGuizhou Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The genetic basis underlying loss-of-virulence mutations that arise among natural phytopathogen populations is not well documented. In this study, we examined the virulence of 377 isolates of Pseudomonas syringae pv. actinidiae biovar 3 (Psa3) that were isolated from 76 kiwifruit orchards suffering from bacterial canker disease. Eighty-four nonpathogenic isolates were identified in 40 orchards. A nonpathogenic isolate G166 was found to be defective in hrpL transcription and the downstream type III secretion system (T3SS)-dependent phenotypes. Comparative genomics and complementary expression assay revealed that a single-base "G" insertion in the hrpL promoter blocks gene transcription by reducing promoter activity. The electrophoretic mobility shift assay showed that the genetic variation impairs σ

Indexed as

GenomicsPseudomonas syringaeBacterial ProteinsMutationPromoter Regions, GeneticBacterial Proteinsbacterial canker of kiwifruitgenetic variationpathogenicityRpoNtype III secretion system

Identifiers

PMID36600466
PMCPMC9923390
OpenAlexW4313544397

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.