ArticleNature2023
Integrated intracellular organization and its variations in human iPS cells.
Abstract read
In one paragraph
Article in Nature, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.
0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
–field-weighted citation impact
What it found
Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.
The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.
Who cites it
82 citing papers in PubMed.
- Mitochondrial dynamics resolve physical-social tensions and challenges through adaptable multi-objective optimisation.bioRxiv : the preprint server for biology · 2026Article
- Differential Expressions Between Colostrum and Mature Milk in Primiparous Holstein Cows with Integrations of Lipidomic and Proteomics.Foods (Basel, Switzerland) · 2026Article
- Data modeling the interplay between single-cell shape, single-cell protein expression, and tissue state.Cell reports methods · 2026Article
- HiExM Enables Scalable Mapping of Organelle Morphology and Spatial Heterogeneity.bioRxiv : the preprint server for biology · 2026Article
- A human induced pluripotent stem cell model for the holistic study of epithelial-to-mesenchymal transitions.Nature methods · 2026Article
- Cell shapes decode molecular phenotypes in image-based spatial proteomics.Cell systems · 2026Article
- Classifying biophysical subpopulations of insulin secretory granules using quantitative whole-cell structure analysis.Structure (London, England : 1993) · 2026Article
- Morphology-robust quantification of subcellular organization in complex cells.bioRxiv : the preprint server for biology · 2026Article
- Fast and interpretable quantification of biological shape heterogeneity via stratified Wasserstein kernel.PLoS computational biology · 2026Article
- Progress and new challenges in image-based profiling.Molecular systems biology · 2026Review
- Deep Learning-Guided Holotomography Reveals Early Structural Remodelling During Pluripotency Exit.bioRxiv : the preprint server for biology · 2026Article
- Spatial relationships between vinculin tension and actin at cell adhesions define cell colony positioning and identity.Biophysical journal · 2026Article
- Artificial intelligence-enabled multi-scale virtual cell: perspective, challenges, and opportunities.Briefings in bioinformatics · 2026Review
- Partially shared multi-modal embedding learns holistic representation of cell state.Nature computational science · 2026Article
- A scoping study of the whole-cell imaging literature as a foundation for the emerging field of cell anatomy.BMC biology · 2026Article
- Integration and harmonization of cell shape images for generative modeling.bioRxiv : the preprint server for biology · 2026Article
- Article
- Label-free imaging of intracellular structures in living mammalian cells via external apodization phase-contrast microscopy.The FEBS journal · 2026Article
- Cell context-dependent in silico organelle localization in label-free microscopy images.Nature methods · 2026Article
- Unraveling Subcellular Ultrastructure with Cyclically Multiplexed Expansion Microscopy.bioRxiv : the preprint server for biology · 2026Article
22 more citing papers are in PubMed but not listed here.
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
84 authors.
Matheus P VianaAllen Institute for Cell Science, Seattle, WA, USA.
Jianxu Chen *Allen Institute for Cell Science, Seattle, WA, USA.
Theo A Knijnenburg *Allen Institute for Cell Science, Seattle, WA, USA.
Ritvik Vasan *Allen Institute for Cell Science, Seattle, WA, USA.
Calysta Yan *Allen Institute for Cell Science, Seattle, WA, USA.
Joy E ArakakiAllen Institute for Cell Science, Seattle, WA, USA.
Matte BaileyAllen Institute for Cell Science, Seattle, WA, USA.
Ben BerryAllen Institute for Cell Science, Seattle, WA, USA.
Antoine BorensztejnAllen Institute for Cell Science, Seattle, WA, USA.
Eva M BrownAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0003-2564-0373
Sara CarlsonAllen Institute for Cell Science, Seattle, WA, USA.
Julie A CassAllen Institute for Cell Science, Seattle, WA, USA.
Basudev ChaudhuriAllen Institute for Cell Science, Seattle, WA, USA.
Kimberly R Cordes MetzlerAllen Institute for Cell Science, Seattle, WA, USA.
Mackenzie E CostonAllen Institute for Cell Science, Seattle, WA, USA.
Zach J CrabtreeAllen Institute for Cell Science, Seattle, WA, USA.
Steve DavidsonAllen Institute for Cell Science, Seattle, WA, USA.
Colette M DeLizoAllen Institute for Cell Science, Seattle, WA, USA.
Shailja DhakaAllen Institute for Cell Science, Seattle, WA, USA.
Stephanie Q DinhAllen Institute for Cell Science, Seattle, WA, USA.
Thao P DoAllen Institute for Cell Science, Seattle, WA, USA.
Justin DomingusAllen Institute for Cell Science, Seattle, WA, USA.
Rory M Donovan-MaiyeAllen Institute for Cell Science, Seattle, WA, USA.
Alexandra J FerranteAllen Institute for Cell Science, Seattle, WA, USA.
Tyler J FosterAllen Institute for Cell Science, Seattle, WA, USA.
Christopher L FrickAllen Institute for Cell Science, Seattle, WA, USA.
Griffin FujiokaAllen Institute for Cell Science, Seattle, WA, USA.
Margaret A FuquaAllen Institute for Cell Science, Seattle, WA, USA.
Jamie L GehringAllen Institute for Cell Science, Seattle, WA, USA.
Kaytlyn A GerbinAllen Institute for Cell Science, Seattle, WA, USA.
Tanya GrancharovaAllen Institute for Cell Science, Seattle, WA, USA.
Benjamin W GregorAllen Institute for Cell Science, Seattle, WA, USA.
Lisa J HarrylockAllen Institute for Cell Science, Seattle, WA, USA.
Amanda HauptAllen Institute for Cell Science, Seattle, WA, USA.
Melissa C HendershottAllen Institute for Cell Science, Seattle, WA, USA.
Caroline HookwayAllen Institute for Cell Science, Seattle, WA, USA.
Alan R HorwitzAllen Institute for Cell Science, Seattle, WA, USA.
H Christopher HughesAllen Institute for Cell Science, Seattle, WA, USA.
Eric J IsaacAllen Institute for Cell Science, Seattle, WA, USA.
Gregory R JohnsonAllen Institute for Cell Science, Seattle, WA, USA.
Brian KimAllen Institute for Cell Science, Seattle, WA, USA.
Andrew N LeonardAllen Institute for Cell Science, Seattle, WA, USA.
Winnie W LeungAllen Institute for Cell Science, Seattle, WA, USA.
Jordan J LucasAllen Institute for Cell Science, Seattle, WA, USA.
Susan A LudmannAllen Institute for Cell Science, Seattle, WA, USA.
Blair M LyonsAllen Institute for Cell Science, Seattle, WA, USA.
Haseeb MalikAllen Institute for Cell Science, Seattle, WA, USA.
Ryan McGregorAllen Institute for Cell Science, Seattle, WA, USA.
Gabe E MedrashAllen Institute for Cell Science, Seattle, WA, USA.
Sean L MeharryAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0001-9261-0401
Kevin MitchamAllen Institute for Cell Science, Seattle, WA, USA.
Irina A MuellerAllen Institute for Cell Science, Seattle, WA, USA.
Timothy L Murphy-StevensAllen Institute for Cell Science, Seattle, WA, USA.
Aditya NathAllen Institute for Cell Science, Seattle, WA, USA.
Angelique M NelsonAllen Institute for Cell Science, Seattle, WA, USA.
Sandra A OluochAllen Institute for Cell Science, Seattle, WA, USA.
Luana PaleologuAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-0780-7822
T Alexander PopielAllen Institute for Cell Science, Seattle, WA, USA.
Megan M Riel-MehanAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0001-8097-0450
Brock RobertsAllen Institute for Cell Science, Seattle, WA, USA.
Lisa M SchaefbauerAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0003-0443-268X
Magdalena SchwarzlAllen Institute for Cell Science, Seattle, WA, USA.
Jamie ShermanAllen Institute for Cell Science, Seattle, WA, USA.
Sylvain SlatonAllen Institute for Cell Science, Seattle, WA, USA.
M Filip SluzewskiAllen Institute for Cell Science, Seattle, WA, USA.
Jacqueline E SmithAllen Institute for Cell Science, Seattle, WA, USA.
Youngmee SulAllen Institute for Cell Science, Seattle, WA, USA.
Madison J Swain-BowdenAllen Institute for Cell Science, Seattle, WA, USA.
W Joyce TangAllen Institute for Cell Science, Seattle, WA, USA.
Derek J ThirstrupAllen Institute for Cell Science, Seattle, WA, USA.
Daniel M ToloudisAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0003-2620-1233
Andrew P TuckerAllen Institute for Cell Science, Seattle, WA, USA.
Veronica ValenciaAllen Institute for Cell Science, Seattle, WA, USA.
Winfried WiegraebeAllen Institute for Cell Science, Seattle, WA, USA.
Thushara WijeratnaAllen Institute for Cell Science, Seattle, WA, USA.
Ruian YangAllen Institute for Cell Science, Seattle, WA, USA.
Rebecca J ZaunbrecherAllen Institute for Cell Science, Seattle, WA, USA.
Ramon Lorenzo D LabitiganDepartment of Biology and Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA.
Adrian L SanbornDepartment of Computer Science, Stanford University, Stanford, CA, USA.
Graham T JohnsonAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-1259-8762
Ruwanthi N GunawardaneAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-2698-5245
Nathalie GaudreaultAllen Institute for Cell Science, Seattle, WA, USA.ORCID http://orcid.org/0000-0002-9220-5366
Julie A TheriotDepartment of Biology and Howard Hughes Medical Institute, University of Washington, Seattle, WA, USA.
Susanne M RafelskiAllen Institute for Cell Science, Seattle, WA, USA. susanner@alleninstitute.org.ORCID http://orcid.org/0000-0002-1399-5970
Funding
MEDICAL SCIENTIST TRAINING PROGRAMT32GM007365 · NIGMS · STANFORD UNIVERSITY · PI CHUA, KATRIN F · 1985 to 2021
$33.8MNIGMS NIH HHS T32 GM007365
Abstract
Understanding how a subset of expressed genes dictates cellular phenotype is a considerable challenge owing to the large numbers of molecules involved, their combinatorics and the plethora of cellular behaviours that they determine
Indexed as
Induced Pluripotent Stem CellsIntracellular SpaceCell PolarityCell ShapeCell SurvivalDatasets as TopicHumansInterphaseMitosisSingle-Cell Analysis
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What OpenQuestion holds
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LicenceCC BY
Read underepoch 390
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.