Evidence map›Paper›PMID 36599353›Full record

ReviewMolecular cell2023

P-TEFb: The master regulator of transcription elongation.

Koh Fujinaga, Fang Huang, B Matija Peterlin

Open access · bronzeAbstract readReview
In one paragraph

Review in Molecular cell, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 95 papers.

0numbers the graph read from it
0cells of the map it votes in
95citing papers in PubMed
22.5field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

95 citing papers in PubMed, 143 citations in OpenAlex.

  1. Review
  2. Article
  3. The CTNNB1-TRIM28 complex governs hormone-induced RNA polymerase II dynamics in kidney epithelial cells.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Targeting CDKs in the RNAPII transcription cycle.Nature reviews. Drug discovery · 2026
    Review
  8. Article
  9. Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Review
  19. Article
  20. Article

35 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Koh FujinagaDepartments of Medicine, Microbiology and Immunology, University of California at San Francisco, San Francisco, CA 94143, USA. Electronic address: koh.fujinaga@ucsf.edu.
Fang HuangDepartments of Medicine, Microbiology and Immunology, University of California at San Francisco, San Francisco, CA 94143, USA.
B Matija PeterlinDepartments of Medicine, Microbiology and Immunology, University of California at San Francisco, San Francisco, CA 94143, USA. Electronic address: matija.peterlin@gmail.com.
University of California, San Francisco · US

Funding

X-ray Screening and Rapid Structure DeterminationP50AI150476 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI EMERMAN, MICHAEL · 2019 to 2021
$14.4M
TAT TransactivationR01AI049104 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI PETERLIN, BORIS MATIJA · 2001 to 2015
$5.3M
Controlling HIV latency by manipulating CycT1 turnoverR01AI167778 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FUJINAGA, KOH · 2022 to 2025
$1.6M
HIV transcriptome analysis during viral latencyR21AI127274 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FUJINAGA, KOH · 2016 to 2017
$436k
Anti-HIV effects by human Piwi proteinsR56AI136683 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FUJINAGA, KOH · 2018 to 2018
$385k
Cytor lncRNA as a positive regulator of HIV gene expression and viral latencyR21AI170195 · NIAID · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI FUJINAGA, KOH · 2022 to 2023
$385k
NIAID NIH HHS P50 AI150476NIAID NIH HHS R01 AI049104NIAID NIH HHS R01 AI167778NIAID NIH HHS R21 AI127274NIAID NIH HHS R21 AI170195NIAID NIH HHS R56 AI136683
6 · The paper itself

Abstract

The positive transcription elongation factor b (P-TEFb) is composed of cyclins T1 or T2 and cyclin-dependent kinase 9 that regulate the elongation phase of transcription by RNA polymerase II. By antagonizing negative elongation factors and phosphorylating the C-terminal domain of RNA polymerase II, P-TEFb facilitates the elongation and co-transcriptional processing of nascent transcripts. This step is critical for the expression of most eukaryotic genes. In growing cells, P-TEFb is regulated negatively by its reversible associations with HEXIM1/2 in the 7SK snRNP and positively by a number of transcription factors, as well as the super elongation complex. In resting cells, P-TEFb falls apart, and cyclin T1 is degraded by the proteasome. This complex regulation of P-TEFb has evolved for the precise temporal and spatial regulation of gene expression in the organism. Its dysregulation contributes to inflammatory and neoplastic conditions.

Indexed as

Positive Transcriptional Elongation Factor BRNA Polymerase IICyclin-Dependent Kinase 9Cyclin THeLa CellsHumansRNA-Binding ProteinsTranscription FactorsTranscription, GeneticCyclin-Dependent Kinase 9Cyclin THEXIM1 protein, humanPositive Transcriptional Elongation Factor BRNA-Binding ProteinsRNA Polymerase IITranscription Factors7SK snRNPancercCDK9CTDcyclin T1degradationelongationP-TEFbRNAPIItranscription

Identifiers

PMID36599353
PMCPMC9898187
OpenAlexW4313530701

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.