Evidence map›Paper›PMID 36599162›Full record

ArticleACS synthetic biology2023

Deep Antimicrobial Activity and Stability Analysis Inform Lysin Sequence-Function Mapping.

Daniel T Tresnak, Benjamin J Hackel

Open access · greenAbstract read
In one paragraph

Article in ACS synthetic biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Sequence-function mapping of proline-rich antimicrobial peptides.bioRxiv : the preprint server for biology · 2024
    Article
  5. Article
  6. Article
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Daniel T TresnakDepartment of Chemical Engineering and Materials Science, University of Minnesota─Twin Cities, 421 Washington Avenue SE, Minneapolis, Minnesota55455, United States.
Benjamin J HackelDepartment of Chemical Engineering and Materials Science, University of Minnesota─Twin Cities, 421 Washington Avenue SE, Minneapolis, Minnesota55455, United States.ORCID 0000-0003-3561-9463
University of Minnesota · US

Funding

Engineering Antimicrobial Polypeptides against Pathogenic BacteriaR01GM121777 · NIGMS · UNIVERSITY OF MINNESOTA · PI HACKEL, BENJAMIN · 2017 to 2020
$1.1M
NIGMS NIH HHS R01 GM121777
6 · The paper itself

Abstract

Antibiotic-resistant infectious disease is a critical challenge to human health. Antimicrobial proteins offer a compelling solution if engineered for potency, selectivity, and physiological stability. Lysins, which lyse cells via degradation of cell wall peptidoglycans, have significant potential to fill this role. Yet, the functional complexity of antimicrobial activity has hindered high-throughput characterization for discovery and design. To dramatically expand knowledge of the sequence-function landscape of lysins, we developed a depletion-based assay for library-scale measurement of lysin inhibitory activity. We coupled this platform with a high-throughput proteolytic stability assay to assess the activity and stability of ∼5 × 10

Indexed as

Anti-Infective AgentsCatalytic DomainHumansPeptidoglycanAnti-Infective AgentsPeptidoglycanantimicrobial proteinlysinmutational scanningsequence−function mapping

Identifiers

PMID36599162
PMCPMC10822705
OpenAlexW4313546451

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.