Evidence map›Paper›PMID 36598949›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Microbial population dynamics decouple growth response from environmental nutrient concentration.

Justus Wilhelm Fink, Noelle A Held, Michael Manhart

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

  1. Cross-feeding enables robust coexistence between four bacterial species.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. The XRE family protein DbuR is a transcriptional repressor of theApplied and environmental microbiology · 2025
    Article
  6. Article
  7. Review
  8. Article
  9. Nutrient colimitation is a quantitative, dynamic property of microbial populations.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  10. Article
  11. Article
  12. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Justus Wilhelm FinkInstitute of Integrative Biology, Department of Environmental Systems Science, Swiss Federal Institute of Technology (ETH Zurich), 8092 Zurich, Switzerland.ORCID 0000-0002-1138-4009
Noelle A HeldInstitute of Integrative Biology, Department of Environmental Systems Science, Swiss Federal Institute of Technology (ETH Zurich), 8092 Zurich, Switzerland.ORCID 0000-0003-1073-0851
Michael ManhartInstitute of Integrative Biology, Department of Environmental Systems Science, Swiss Federal Institute of Technology (ETH Zurich), 8092 Zurich, Switzerland.ORCID 0000-0003-3791-9056

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

How the growth rate of a microbial population responds to the environmental availability of chemical nutrients and other resources is a fundamental question in microbiology. Models of this response, such as the widely used Monod model, are generally characterized by a maximum growth rate and a half-saturation concentration of the resource. What values should we expect for these half-saturation concentrations, and how should they depend on the environmental concentration of the resource? We survey growth response data across a wide range of organisms and resources. We find that the half-saturation concentrations vary across orders of magnitude, even for the same organism and resource. To explain this variation, we develop an evolutionary model to show that demographic fluctuations (genetic drift) can constrain the adaptation of half-saturation concentrations. We find that this effect fundamentally differs depending on the type of population dynamics: Populations undergoing periodic bottlenecks of fixed size will adapt their half-saturation concentrations in proportion to the environmental resource concentrations, but populations undergoing periodic dilutions of fixed size will evolve half-saturation concentrations that are largely decoupled from the environmental concentrations. Our model not only provides testable predictions for laboratory evolution experiments, but it also reveals how an evolved half-saturation concentration may not reflect the organism's environment. In particular, this explains how organisms in resource-rich environments can still evolve fast growth at low resource concentrations. Altogether, our results demonstrate the critical role of population dynamics in shaping fundamental ecological traits.

Indexed as

AcclimatizationBiological EvolutionAdaptation, PhysiologicalNutrientsPopulation DynamicsNutrientshalf-saturation concentrationmicrobial evolutionMonod modelresource competitionselection–drift balance

Identifiers

PMID36598949
PMCPMC9926246

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.