Evidence map›Paper›PMID 36598487›Full record

ArticleApplied and environmental microbiology2023

Identification of a Novel Coumarins Biosynthetic Pathway in the Endophytic Fungus Fusarium oxysporum GU-7 with Antioxidant Activity.

Yifan Sun, Guangxi Ren, Qijin Shi, Hongyu Zhu, Na Zhou, Xianghe Kong, Dan Jiang, Chunsheng Liu

Open access · greenAbstract read
In one paragraph

Article in Applied and environmental microbiology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
2.7field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yifan SunSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.
Guangxi RenSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.
Qijin ShiSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.
Hongyu ZhuSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.
Na ZhouSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.
Xianghe KongSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.
Dan JiangSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.
Chunsheng LiuSchool of Chinese Materia Medica, Beijing University of Chinese Medicine, Beijing, China.ORCID 0000-0001-8514-8925
Beijing University of Chinese Medicine · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Coumarins are generally considered to be produced by natural plants. Fungi have been reported to produce coumarins, but their biosynthetic pathways are still unknown. In this study, Fusarium oxysporum GU-7 and GU-60 were isolated from Glycyrrhiza uralensis, and their antioxidant activities were determined to be significantly different. Abundant dipeptide, phenolic acids, and the plant-derived coumarins fraxetin and scopoletin were identified in GU-7 by untargeted metabolomics, and these compounds may account for its stronger antioxidant activity compared to GU-60. Combined with metabolome and RNA sequencing analysis, we identified 24 potentially key genes involved in coumarin biosynthesis and 6 intermediate metabolites. Interestingly, the best hit of

Indexed as

AntioxidantsArabidopsisBiosynthetic PathwaysCoumarinsFusariumIronPlantsScopoletinAntioxidantsCoumarinsGU 7IronScopoletinantioxidantcoumarinendophytic fungusfraxetinmetabolomeRNA-Seqscopoletin

Identifiers

PMID36598487
PMCPMC9888266
OpenAlexW4313488803

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.