Evidence map›Paper›PMID 36598460›Full record

ArticleTranslational vision science & technology2023

Assessment of Murine Retinal Acuity Ex Vivo Using Multielectrode Array Recordings.

Darwin Babino, Tyler Benster, Laura Laprell, Russell N Van Gelder

Open access · goldAbstract read
In one paragraph

Article in Translational vision science & technology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact, top 100% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 0 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Darwin BabinoDepartments of Ophthalmology, University of Washington School of Medicine, Seattle, WA, USA.
Tyler BensterDepartments of Ophthalmology, University of Washington School of Medicine, Seattle, WA, USA.
Laura LaprellDepartments of Ophthalmology, University of Washington School of Medicine, Seattle, WA, USA.
Russell N Van GelderDepartments of Ophthalmology, University of Washington School of Medicine, Seattle, WA, USA.
University of Washington · US

Funding

Vision Research CoreP30EY001730 · NEI · UNIVERSITY OF WASHINGTON · PI Jay Neitz · 1985 to 2026
$23.5M
Photoswitchable channel blockers for treatment of blindnessR24EY023937 · NEI · UNIVERSITY OF WASHINGTON · PI VAN GELDER, RUSSELL N. · 2014 to 2018
$6.1M
Assessment of murine retinal acuity ex vivo by machine learning of multielectrode array recordingsR00EY031333 · NEI · UPSTATE MEDICAL UNIVERSITY · PI Darwin Babino · 2024 to 2026
$746k
Assessment of murine retinal acuity ex vivo by machine learning of multielectrode array recordingsK99EY031333 · NEI · UNIVERSITY OF WASHINGTON · PI BABINO, DARWIN · 2020 to 2021
$226k
NEI NIH HHS K99 EY031333NEI NIH HHS P30 EY001730NEI NIH HHS R00 EY031333NEI NIH HHS R24 EY023937
6 · The paper itself

Abstract

Purpose: Visual acuity, measured by resolution of optotypes on a standard eye chart, is a critical clinical test for function of the visual system in humans. Behavioral tests in animals can be used to estimate visual acuity. However, such tests may be limited in the study of mutants or after synthetic vision restoration techniques. Because the total response of the retina to a visual scene is encoded in spiking patterns of retinal ganglion cells, it should be possible to estimate visual acuity in vitro from the retina by analyzing retinal ganglion cell output in response to test stimuli. Methods: We created a method, EyeCandy, that combines a visual stimulus-generating engine with analysis of multielectrode array retinal recordings via a machine learning approach to measure murine retinal acuity in vitro. Visual stimuli included static checkerboards, drifting gratings, and letter optotypes. Results: In retinas from wild-type C57Bl/6 mice, retinal acuity measurement for a drifting grating was 0.4 cycles per degree. In contrast, retinas from adult rd1 mice with outer retinal degeneration showed no detectable acuity. A comparison of acuities among different regions of the retina revealed substantial variation, with the inferior-nasal quadrant having highest RA. Letter classification accuracy of a projected Early Treatment Diabetic Retinopathy eye chart reached 99% accuracy for logMAR 3.0 letters. EyeCandy measured a restored RA of 0.05 and 0.08 cycles per degree for static and dynamic stimuli respectively from the retina of the rd1 mouse treated with the azobenzene photoswitch BENAQ. Conclusions: Machine learning may be used to estimate retinal acuity. Translational Relevance: The use of ex vivo retinal acuity measurement may allow determination of effects of mutations, drugs, injury, or other manipulations on retinal visual function.

Indexed as

RetinaRetinal Ganglion CellsAdultAnimalsHumansMiceMice, Inbred C57BLVision TestsVisual Acuity

Identifiers

PMID36598460
PMCPMC9832724
OpenAlexW4313543594

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.