Evidence map›Paper›PMID 36598194›Full record

ArticlemBio2023

Central Role of Sibling Small RNAs NgncR_162 and NgncR_163 in Main Metabolic Pathways of Neisseria gonorrhoeae.

Thomas Steiner, Marie Zachary, Susanne Bauer, Martin J Müller, Markus Krischke, Sandra Radziej, Maximilian Klepsch, Bruno Huettel, Wolfgang Eisenreich, Thomas Rudel and 1 more

Open access · goldAbstract read
In one paragraph

Article in mBio, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
2.0field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 2 institutions in 1 country.

Thomas SteinerBavarian NMR Center-Structural Membrane Biochemistry, Department of Chemistry, Technical University of Munich, Garching, Germany.
Marie ZacharyChair of Microbiology, Theodor-Boveri-Institute, University of Würzburg, Würzburg, Germany.
Susanne BauerChair of Microbiology, Theodor-Boveri-Institute, University of Würzburg, Würzburg, Germany.
Martin J MüllerDepartment of Pharmaceutical Biology, Julius von Sachs Institute, University of Würzburg, Würzburg, Germany.
Markus KrischkeDepartment of Pharmaceutical Biology, Julius von Sachs Institute, University of Würzburg, Würzburg, Germany.
Sandra RadziejBavarian NMR Center-Structural Membrane Biochemistry, Department of Chemistry, Technical University of Munich, Garching, Germany.
Maximilian KlepschChair of Microbiology, Theodor-Boveri-Institute, University of Würzburg, Würzburg, Germany.
Bruno HuettelMax Planck Genome Centre, Cologne, Germany.
Wolfgang EisenreichBavarian NMR Center-Structural Membrane Biochemistry, Department of Chemistry, Technical University of Munich, Garching, Germany.
Thomas RudelChair of Microbiology, Theodor-Boveri-Institute, University of Würzburg, Würzburg, Germany.ORCID 0000-0003-4740-6991
Dagmar BeierChair of Microbiology, Theodor-Boveri-Institute, University of Würzburg, Würzburg, Germany.
University of Würzburg · DETechnical University of Munich · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Small bacterial regulatory RNAs (sRNAs) have been implicated in the regulation of numerous metabolic pathways. In most of these studies, sRNA-dependent regulation of mRNAs or proteins of enzymes in metabolic pathways has been predicted to affect the metabolism of these bacteria. However, only in a very few cases has the role in metabolism been demonstrated. Here, we performed a combined transcriptome and metabolome analysis to define the regulon of the sibling sRNAs NgncR_162 and NgncR_163 (NgncR_162/163) and their impact on the metabolism of Neisseria gonorrhoeae. These sRNAs have been reported to control genes of the citric acid and methylcitric acid cycles by posttranscriptional negative regulation. By transcriptome analysis, we now expand the NgncR_162/163 regulon by several new members and provide evidence that the sibling sRNAs act as both negative and positive regulators of target gene expression. Newly identified NgncR_162/163 targets are mostly involved in transport processes, especially in the uptake of glycine, phenylalanine, and branched-chain amino acids. NgncR_162/163 also play key roles in the control of serine-glycine metabolism and, hence, probably affect biosyntheses of nucleotides, vitamins, and other amino acids via the supply of one-carbon (C

Indexed as

Neisseria gonorrhoeaeRNA, Small UntranslatedAmino AcidsBacteriaGene Expression Regulation, BacterialHumansMetabolic Networks and PathwaysNucleotidesRNA, BacterialSiblingsVitaminsAmino AcidsNucleotidesRNA, BacterialRNA, Small UntranslatedVitaminsamino acid transporterbipartite metabolismNeisseria gonorrhoeaeposttranscriptional regulationsRNA

Identifiers

PMID36598194
PMCPMC9973317
OpenAlexW4313488544

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.