Evidence map›Paper›PMID 36596684›Full record

ArticleInfection & chemotherapy2022

First Isolates of OXA-48-Like Carbapenemase-Producing

Freddy Villanueva-Cotrina, Dick Mamani Condori, Tamin Ortiz Gomez, Katia Mallma Yactayo, Heli Barron-Pastor

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Article in Infection & chemotherapy, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.2field-weighted citation impact, top 58% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 3 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Freddy Villanueva-CotrinaDepartment of Pathology, Instituto Nacional de Enfermedades Neoplasicas, Lima, Peru.ORCID https://orcid.org/0000-0001-8578-274X
Dick Mamani CondoriDepartment of Pathology, Instituto Nacional de Enfermedades Neoplasicas, Lima, Peru.ORCID https://orcid.org/0000-0002-2615-7108
Tamin Ortiz GomezDepartment of Pathology, AUNA Laboratory. Lima, Peru.ORCID https://orcid.org/0000-0003-2857-5052
Katia Mallma YactayoDepartment of Pathology, Instituto Nacional de Enfermedades Neoplasicas, Lima, Peru.ORCID https://orcid.org/0000-0002-4037-1637
Heli Barron-PastorGroup of Research and Teaching in Molecular Medicine, Universidad Nacional Mayor de San Marcos, Lima, Peru.ORCID https://orcid.org/0000-0002-4041-4406
National University of San Marcos · PEInstituto Nacional de Enfermedades Neoplásicas · PE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundOXA-48-like carbapenemases have been found in a growing and varied number of carbapenemase-producing MATERIALS AND

methodsThe study was carried out at the Instituto Nacional de Enfermedades Neoplasicas, Lima - Peru, between March and December 2021. OXA-48-like CPE isolates were detected as part of the routine microbiological study, and clinical data were obtained by reviewing medical records. The automated microbiological system provides the bacterial identification and antimicrobial susceptibility profile by the dilution method. Additionally, the column chromatography test is used to detect carbapenemase enzymes, including OXA-48-like. Finally, the molecular identification of the OXA-48-like enzyme was carried out by Polymerase Chain Reaction PCR amplification for the

resultsSeven OXA-48-like CPE strains were isolated. Notably, in all cases, the automated system issued a minimum inhibitory concentration (MIC) of ≥1 ug/mL for ertapenem and a MIC of >64/4 ug/mL for piperacillin/tazobactam. In addition, resistance category to imipenem and meropenem was found (2/7), at least one indeterminate category for any of these carbapenems (5/7), and other serine β-lactamases such as Extended-spectrum beta-lactamases (3/7) and AmpC (3/7). The immunochromatographic study confirmed the presence of the OXA-48-like enzyme in all isolates, while class A and class B were ruled out for them. Finally, the multiplex PCR, for the five isolates that could be recovered, showed amplification for carbapenemase OXA-48-like, while none of the other carpabemases was amplified for class A or class B carbapenemase genes.

conclusionWe confirm the emergence of OXA-48-like CPE isolates in our cancer center and highlight the need to implement surveillance and detection measures of these strains, for controlling their dissemination. We found practical and inexpensive methodologies for the detection of OXA-48-like CPE: (1) the finding of resistance to ertapenem and piperacillin/tazobactam in the antibiogram in the absence of class A and B carbapenemases, for screening and (2) immunochromatographic study, for confirmation.

Indexed as

EmergenceLaboratory detectionMolecular identificationOncology patients

Identifiers

PMID36596684
PMCPMC9840961
OpenAlexW4312339128

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.