Evidence map›Paper›PMID 36594010›Full record

ArticleiScience2023

Dynamics of endogenous PARP1 and PARP2 during DNA damage revealed by live-cell single-molecule imaging.

Jyothi Mahadevan, Asmita Jha, Johannes Rudolph, Samuel Bowerman, Domenic Narducci, Anders S Hansen, Karolin Luger

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.9field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. PARP1 Exhibits an Enzymatically Inactive Chromatin Binding Mode.bioRxiv : the preprint server for biology · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Jyothi MahadevanDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Asmita JhaDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Johannes RudolphDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Samuel BowermanDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Domenic NarducciDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Anders S HansenDepartment of Biological Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.
Karolin LugerDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO 80309, USA.
Massachusetts Institute of Technology · USHoward Hughes Medical Institute · USUniversity of Colorado Boulder · US

Funding

Center for 3D Structure and Physics of the GenomeUM1HG011536 · NHGRI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI DEKKER, JOB, MIRNY, LEONID A · 2020 to 2024
$11.8M
Structure and Mechanism of Chromatin-Bound PARP1R01CA218255 · NCI · UNIVERSITY OF COLORADO · PI Karolin Luger · 2017 to 2026
$4.5M
DYNAMIC BOTTOM-UP DISSECTION OF CHROMATIN LOOPING AND GENE REGULATIONDP2GM140938 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HANSEN, ANDERS SEJR · 2020 to 2020
$2.3M
Super-resolution microscopy for dynamic analysis of focal enhancer amplifications in cancerR33CA257878 · NCI · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HANSEN, ANDERS SEJR · 2021 to 2023
$1.1M
Molecular mechanisms regulating chromatin looping in time and spaceR00GM130896 · NIGMS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HANSEN, ANDERS SEJR · 2020 to 2022
$747k
NCI NIH HHS R01 CA218255NCI NIH HHS R33 CA257878NHGRI NIH HHS UM1 HG011536NIGMS NIH HHS DP2 GM140938NIGMS NIH HHS R00 GM130896
6 · The paper itself

Abstract

PARP1 contributes to genome architecture and DNA damage repair through its dynamic association with chromatin. PARP1 and PARP2 (PARP1/2) recognize damaged DNA and recruit the DNA repair machinery. Using single-molecule microscopy in live cells, we monitored the movement of PARP1/2 on undamaged and damaged chromatin. We identify two classes of freely diffusing PARP1/2 and two classes of bound PARP1/2. The majority (>60%) of PARP1/2 diffuse freely in both undamaged and damaged nuclei and in the presence of inhibitors of PARP1/2 used for cancer therapy (PARPi). Laser-induced DNA damage results in a small fraction of slowly diffusing PARP1 and PARP2 to become transiently bound. Treatment of cells with PARPi in the presence of DNA damage causes subtle changes in the dynamics of bound PARP1/2, but not the high levels of PARP1/2 trapping seen previously. Our results imply that next-generation PARPi could specifically target the small fraction of DNA-bound PARP1/2.

Indexed as

Biological sciencesCell biologyMolecular biologyOrganizational aspects of cell biology

Identifiers

PMID36594010
PMCPMC9804145
OpenAlexW4311141021

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.