Evidence map›Paper›PMID 36592373›Full record

ArticleChembiochem : a European journal of chemical biology2023

Biochemical Analysis Leads to Improved Orthogonal Bioluminescent Tools.

Sierra J Williams, Jordan A Gewing-Mullins, Whitney K Lieberman, Bethany Kolbaba-Kartchner, Reema Iqbal, Hana M Burgess, Clair M Colee, Marya Y Ornelas, Edison S Reid-McLaughlin, Jeremy H Mills and 2 more

Abstract read
In one paragraph

Article in Chembiochem : a European journal of chemical biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Sierra J WilliamsDepartment of Chemistry, University of California, Irvine, 1120 Natural Science II, Irvine, CA 92697, USA.
Jordan A Gewing-MullinsW.M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, The Claremont Colleges, 925 N. Mills Ave., Claremont, CA 91711, USA.
Whitney K LiebermanW.M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, The Claremont Colleges, 925 N. Mills Ave., Claremont, CA 91711, USA.
Bethany Kolbaba-KartchnerSchool of Molecular Sciences, Arizona State University, Physical Sciences Center PSd-D102, Tempe, AZ 85287, USA.
Reema IqbalW.M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, The Claremont Colleges, 925 N. Mills Ave., Claremont, CA 91711, USA.
Hana M BurgessW.M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, The Claremont Colleges, 925 N. Mills Ave., Claremont, CA 91711, USA.
Clair M ColeeW.M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, The Claremont Colleges, 925 N. Mills Ave., Claremont, CA 91711, USA.
Marya Y OrnelasW.M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, The Claremont Colleges, 925 N. Mills Ave., Claremont, CA 91711, USA.
Edison S Reid-McLaughlinW.M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, The Claremont Colleges, 925 N. Mills Ave., Claremont, CA 91711, USA.
Jeremy H MillsSchool of Molecular Sciences, Arizona State University, Physical Sciences Center PSd-D102, Tempe, AZ 85287, USA.
Jennifer A PrescherDepartment of Chemistry, University of California, Irvine, 1120 Natural Science II, Irvine, CA 92697, USA.
Aaron M LeconteW.M. Keck Science Department of Claremont McKenna, Pitzer, and Scripps Colleges, The Claremont Colleges, 925 N. Mills Ave., Claremont, CA 91711, USA.ORCID 0000-0002-5789-9147

Funding

purchase of an All-in-One Fluorescence MicroscopeR01GM107630 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI PRESCHER, JENNIFER · 2013 to 2021
$2.6M
New tools for quantitative non-invasive recording of biochemical signalsR01CA279813 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Jennifer Prescher, Nathan Christopher Shaner · 2024 to 2026
$2.0M
High-throughput characterization and engineering of brighter luciferasesR15GM135860 · NIGMS · SCRIPPS COLLEGE · PI LECONTE, AARON MORGAN · 2019 to 2025
$866k
NCI NIH HHS R01 CA279813NIGMS NIH HHS R01 GM107630NIGMS NIH HHS R15 GM135860NIH HHS 2R01 GM107630
6 · The paper itself

Abstract

Engineered luciferase-luciferin pairs have expanded the number of cellular targets that can be visualized in tandem. While light production relies on selective processing of synthetic luciferins by mutant luciferases, little is known about the origin of selectivity. The development of new and improved pairs requires a better understanding of the structure-function relationship of bioluminescent probes. In this work, we report a biochemical approach to assessing and optimizing two popular bioluminescent pairs: Cashew/d-luc and Pecan/4'-BrLuc. Single mutants derived from Cashew and Pecan revealed key residues for selectivity and thermal stability. Stability was further improved through a rational addition of beneficial residues. In addition to providing increased stability, the known stabilizing mutations surprisingly also improved selectivity. The resultant improved pair of luciferases are >100-fold selective for their respective substrates and highly thermally stable. Collectively, this work highlights the importance of mechanistic insight for improving bioluminescent pairs and provides significantly improved Cashew and Pecan enzymes which should be immediately suitable for multicomponent imaging applications.

Indexed as

Firefly LuciferinLuminescent MeasurementsLuciferasesLuciferinsMutationFirefly LuciferinLuciferasesLuciferinsbiochemical characterizationbioluminescenceluciferaseluciferinthermostability

Identifiers

PMID36592373
PMCPMC10265744

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.