Evidence map›Paper›PMID 36592289›Full record

ArticleMolecular biology reports2023

Herbal species authentication by melting fingerprint coupled with high resolution melting analysis (MF-HRM).

Kittisak Buddhachat, Jinnaphat Thongphueak, Phanupong Changtor, Wanrachon Nukool, Maturada Saengthong, Puntitra Kamol, Urasri Suyasunanont, Prasuk Kosavititkul, Waranee Pradit, Korakot Nganvongpanit and 1 more

Abstract read
PubMed Publisher
In one paragraph

Article in Molecular biology reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Kittisak BuddhachatDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand. kittisakbu@nu.ac.th.ORCID http://orcid.org/0000-0003-4746-9861
Jinnaphat ThongphueakDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Phanupong ChangtorDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Wanrachon NukoolDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Maturada SaengthongDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Puntitra KamolDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Urasri SuyasunanontDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Prasuk KosavititkulDepartment of Biology, Faculty of Science, Naresuan University, Phitsanulok, 65000, Thailand.
Waranee PraditResearch Center in Bioresources for Agriculture, Industry and Medicine, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand.
Korakot NganvongpanitDepartment of Veterinary Biosciences and Public Health, Faculty of Veterinary Medicine, Chiang Mai University, Chiang Mai, 50100, Thailand.
Siriwadee ChomdejResearch Center in Bioresources for Agriculture, Industry and Medicine, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, 50200, Thailand. siriwadee@yahoo.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundHerbal medicines have recently attracted increasing attention for use as food supplements with health benefits; however, species authentication can be difficult due to incomplete morphological characters. Here, a molecular tool was developed for the identification of species in the National List of Essential Medicinal Plants in Thailand.

methodsThe identification process used DNA fingerprints including start codon targeted (SCoT) and inter simple sequence repeat (ISSR) polymorphisms, coupled with high resolution melting (HRM), to produce melting fingerprint (MF)-HRM.

resultsResults indicated that MF-HRM, SCoT-HRM and ISSR-HRM could be used for DNA fingerprints as S34, S36, S9 and S8 of SCoT and UBC873, S25 and UBC841 of ISSR. The melting fingerprints obtained from S34 of SCoT exhibited the best primers for identification of herbal species with 87.5% accuracy and relatively high repeatability. The presence of intraspecific variation in a few species affected the shift of melting fingerprints within species. MF-HRM using S34 showed improved species prediction compared to DNA fingerprints. The concentration of DNA with 10 ng/µl was recommended to perform MF-HRM. MF-HRM enabled species authentication of herbal commercialized products at only 20% resulting from the low quality of DNA isolated, while admixture of multiple product species interfered with the MF process.

conclusionFindings suggested that MF-HRM showed promise as a molecular tool for the authentication of species in commercial herbal products with high specificity, moderate repeatability and rapidity without prior sequence information. This information will greatly improve quality control and traceability during the manufacturing process.

Indexed as

DNA Barcoding, TaxonomicPlants, MedicinalDNA, PlantDNA PrimersPolymerase Chain ReactionDNA, PlantDNA PrimersDNA fingerprintISSRMedicinal plantPharmacovigilanceSCoT

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.