Evidence map›Paper›PMID 36590164›Full record

ArticleiScience2023

THOC5 complexes with DDX5, DDX17, and CDK12 to regulate R loop structures and transcription elongation rate.

Mareike Polenkowski, Aldrige Bernardus Allister, Sebastian Burbano de Lara, Andrew Pierce, Bethany Geary, Omar El Bounkari, Lutz Wiehlmann, Andrea Hoffmann, Anthony D Whetton, Teruko Tamura and 1 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Unscheduled excessive R-loops in immune response.Functional & integrative genomics · 2024
    Article
  6. Article
  7. Review
  8. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Mareike PolenkowskiDepartment of Gastroenterology, Hepatology and Endocrinology, Hannover Medical School, Hannover D-30623, Germany.
Aldrige Bernardus AllisterDepartment of Gastroenterology, Hepatology and Endocrinology, Hannover Medical School, Hannover D-30623, Germany.
Sebastian Burbano de LaraGerman Cancer Research Center (DKFZ), 69120 Heidelberg, Germany.
Andrew PierceStem Cell and Leukemia Protoemics Laboratory, University of Manchester, Manchester M20 3LJ, UK.
Bethany GearyStem Cell and Leukemia Protoemics Laboratory, University of Manchester, Manchester M20 3LJ, UK.
Omar El BounkariInstitute for Stroke and Dementia Research, Ludwig-Maximilians-Universität, 81377 Munich, Germany.
Lutz WiehlmannPädiatrische Pneumologie Hannover Medical School, Hannover D-30623, Germany.
Andrea HoffmannDepartment of Orthopedic Surgery, Hannover Medical School, Hannover D-30623, Germany.
Anthony D WhettonStoller Biomarker Discovery Centre, University of Manchester, Manchester M13 9PL, UK.
Teruko TamuraInstitut für Zellbiochemie, Medizinische Hochschule Hannover, Hannover D-30623, Germany.
Doan Duy Hai TranDepartment of Gastroenterology, Hepatology and Endocrinology, Hannover Medical School, Hannover D-30623, Germany.
Medizinische Hochschule Hannover · DEUniversity of Manchester · GBGerman Cancer Research Center · DELudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

THOC5, a member of the THO complex, is essential for the 3'processing of some inducible genes, the export of a subset of mRNAs and stem cell survival. Here we show that THOC5 depletion results in altered 3'cleavage of >50% of mRNAs and changes in RNA polymerase II binding across genes. THOC5 is recruited close to high-density polymerase II sites, suggesting that THOC5 is involved in transcriptional elongation. Indeed, measurement of elongation rates

Indexed as

Cell biologyMolecular biology

Identifiers

PMID36590164
PMCPMC9800341
OpenAlexW4310927676

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.