Evidence map›Paper›PMID 36590162›Full record

ArticleiScience2023

Single-nuclei transcriptome analysis of Huntington disease iPSC and mouse astrocytes implicates maturation and functional deficits.

Andrea M Reyes-Ortiz, Edsel M Abud, Mara S Burns, Jie Wu, Sarah J Hernandez, Nicolette McClure, Keona Q Wang, Corey J Schulz, Ricardo Miramontes, Alice Lau and 9 more

Open access · goldAbstract read
In one paragraph

Article in iScience, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Decoding neurodegeneration one cell at a time.The Journal of clinical investigation · 2026
    Review
  4. Article
  5. Silmitasertib, an FDA-designated orphan CK2 inhibitor, ameliorates neuropathology and motor dysfunction in a Huntington's disease mouse model.Neurotherapeutics : the journal of the American Society for Experimental NeuroTherapeutics · 2026
    Article
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  10. Article
  11. Article
  12. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 2 institutions in 1 country.

Andrea M Reyes-OrtizDepartment of Biological Chemistry, University of California, Irvine, Irvine, CA 92617, USA.
Edsel M AbudDepartment of Neurobiology & Behavior, University of California, Irvine, Irvine, CA 92617, USA.
Mara S BurnsDepartment of Neurobiology & Behavior, University of California, Irvine, Irvine, CA 92617, USA.
Jie WuDepartment of Biological Chemistry, University of California, Irvine, Irvine, CA 92617, USA.
Sarah J HernandezDepartment of Neurobiology & Behavior, University of California, Irvine, Irvine, CA 92617, USA.
Nicolette McClureSue and Bill Gross Stem Cell Research Center, University of California, Irvine, Irvine, CA 92617, USA.
Keona Q WangDepartment of Neurobiology & Behavior, University of California, Irvine, Irvine, CA 92617, USA.
Corey J SchulzSue and Bill Gross Stem Cell Research Center, University of California, Irvine, Irvine, CA 92617, USA.
Ricardo MiramontesInstitute for Memory Impairments and Neurological Disorders, University of California, Irvine, Irvine, CA 92617, USA.
Alice LauDepartment of Psychiatry & Human Behavior, University of California, Irvine, Irvine, CA 92617, USA.
Neethu MichaelDepartment of Neurobiology & Behavior, University of California, Irvine, Irvine, CA 92617, USA.
Emily MiyoshiDepartment of Neurobiology & Behavior, University of California, Irvine, Irvine, CA 92617, USA.
David Van VactorHarvard Medical School, Department of Cell Biology, Boston, MA 02115, USA.
John C ReidlingInstitute for Memory Impairments and Neurological Disorders, University of California, Irvine, Irvine, CA 92617, USA.
Mathew Blurton-JonesDepartment of Neurobiology & Behavior, University of California, Irvine, Irvine, CA 92617, USA.
Vivek SwarupDepartment of Neurobiology & Behavior, University of California, Irvine, Irvine, CA 92617, USA.
Wayne W PoonInstitute for Memory Impairments and Neurological Disorders, University of California, Irvine, Irvine, CA 92617, USA.
Ryan G LimInstitute for Memory Impairments and Neurological Disorders, University of California, Irvine, Irvine, CA 92617, USA.
Leslie M ThompsonDepartment of Biological Chemistry, University of California, Irvine, Irvine, CA 92617, USA.
University of California, Irvine · USHarvard University · US

Funding

Univ.of Calif., Irvine Cancer Center Support GrantP30CA062203 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Melanie Funes · 1994 to 2026
$57.9M
UC Irvine Alzheimer's Disease Research Center Induced Pluripotent Stem Cell CoreP50AG016573 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI LAFERLA, FRANK M · 2000 to 2019
$37.0M
Molecular Mechanisms of Pathogenesis in Huntington’s diseaseR35NS116872 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI Leslie Michels Thompson · 2020 to 2026
$8.5M
Project 3: TRiC modulation of CNS pathogenesis in HD mouse modelsP01NS092525 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI THOMPSON, LESLIE MICHELS · 2016 to 2020
$6.3M
Epigenetic Pathology and Therapy in Huntington's DiseaseR01NS089076 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI FRAENKEL, ERNEST, HOUSMAN, DAVID · 2015 to 2024
$4.9M
Training Program in Stem Cell Translational Medicine for Neurological DisordersT32NS082174 · NINDS · UNIVERSITY OF CALIFORNIA-IRVINE · PI PETER John DONOVAN, Leslie Michels Thompson · 2013 to 2026
$3.3M
Oligodendrocyte heterogeneity in Alzheimer' s diseaseRF1AG071683 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI SWARUP, VIVEK, ZHANG, JING · 2021 to 2024
$2.2M
Cell autonomous and non-cell autonomous phenotypes due to genetic risk for late onset Alzheimers diseaseR01AG068992 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI POON, WAYNE W · 2024 to 2025
$1.4M
Oligodendrocyte heterogeneity in Alzheimer' s diseaseR01AG071683 · NIA · UNIVERSITY OF CALIFORNIA-IRVINE · PI SWARUP, VIVEK · 2024 to 2025
$1.2M
PacBio RS Single Molecule, Real-Time (SMRT) DNA SequencerS10OD010794 · OD · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2012 to 2012
$600k
High-Throughput DNA SequencerS10OD021718 · OD · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2016 to 2016
$600k
High Throughput DNA SequencerS10RR025496 · NCRR · UNIVERSITY OF CALIFORNIA-IRVINE · PI SANDMEYER, SUZANNE · 2009 to 2009
$500k
NCI NIH HHS P30 CA062203NCRR NIH HHS S10 RR025496NIA NIH HHS P50 AG016573NIA NIH HHS R01 AG068992NIA NIH HHS R01 AG071683NIA NIH HHS RF1 AG071683NIH HHS S10 OD010794NIH HHS S10 OD021718NINDS NIH HHS P01 NS092525NINDS NIH HHS R01 NS089076NINDS NIH HHS R21 NS123207NINDS NIH HHS R35 NS116872NINDS NIH HHS T32 NS082174
6 · The paper itself

Abstract

Huntington disease (HD) is a neurodegenerative disorder caused by expanded CAG repeats in the huntingtin gene that alters cellular homeostasis, particularly in the striatum and cortex. Astrocyte signaling that establishes and maintains neuronal functions are often altered under pathological conditions. We performed single-nuclei RNA-sequencing on human HD patient-induced pluripotent stem cell (iPSC)-derived astrocytes and on striatal and cortical tissue from R6/2 HD mice to investigate high-resolution HD astrocyte cell state transitions. We observed altered maturation and glutamate signaling in HD human and mouse astrocytes. Human HD astrocytes also showed upregulated actin-mediated signaling, suggesting that some states may be cell-autonomous and human specific. In both species, astrogliogenesis transcription factors may drive HD astrocyte maturation deficits, which are supported by rescued climbing deficits in HD drosophila with NFIA knockdown. Thus, dysregulated HD astrocyte states may induce dysfunctional astrocytic properties, in part due to maturation deficits influenced by astrogliogenesis transcription factor dysregulation.

Indexed as

NeurologyOmics

Identifiers

PMID36590162
PMCPMC9800269
OpenAlexW4313420139

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.