Evidence map›Paper›PMID 36589083›Full record

ArticleFrontiers in plant science2022

Machine learning and analysis of genomic diversity of "

Jiaquan Huang, Iobana Alanís-Martínez, Lucita Kumagai, Zehan Dai, Zheng Zheng, Adalberto A Perez de Leon, Jianchi Chen, Xiaoling Deng

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Jiaquan HuangDepartment of Plant Pathology, South China Agricultural University, Guangzhou, Guangdong, China.
Iobana Alanís-MartínezNational Station of Plant Epidemiology, Quarantine and Sanitation, SENASICA, Queretaro, Mexico.
Lucita KumagaiPlant Pest Diagnostic Center, California Department of Food and Agriculture, Sacramento, CA, United States.
Zehan DaiDepartment of Plant Pathology, South China Agricultural University, Guangzhou, Guangdong, China.
Zheng ZhengDepartment of Plant Pathology, South China Agricultural University, Guangzhou, Guangdong, China.
Adalberto A Perez de LeonUnited States Department of Agriculture-Agricultural Research Service (USDA-ARS), San Joaquín Valley Agricultural Sciences Center, Parlier, CA, United States.
Jianchi ChenUnited States Department of Agriculture-Agricultural Research Service (USDA-ARS), San Joaquín Valley Agricultural Sciences Center, Parlier, CA, United States.
Xiaoling DengDepartment of Plant Pathology, South China Agricultural University, Guangzhou, Guangdong, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Huanglongbing (HLB, yellow shoot disease) is a highly destructive citrus disease associated with a nonculturable bacterium, " Methods and results: In this study, 40 CLas-infected ACP samples from 20 states in Mexico were collected. CLas was detected and confirmed by PCR assays. A prophage gene( Conclusions: This study concluded that: 1) there were at least two different introductions of CLas into Mexico; 2) CLas strains between Mexico and USA are closely related; and 3) The two Geno-groups provide the basis for future CLas subspecies research.

Indexed as

“Candidatus Liberibacter asiaticus”citrus HLBgenomic diversitymachine learningmexico HLBprincipal component analysis (PCA)single nucleotide polymorphismssparse partial least squares discriminant analysis (sPLS-DA)

Identifiers

PMID36589083
PMCPMC9798433

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.