Evidence map›Paper›PMID 36585101›Full record

ArticleJournal of advanced research2023

Phyllosphere-associated microbiota in built environment: Do they have the potential to antagonize human pathogens?

Wisnu Adi Wicaksono, Tamara Reisenhofer-Graber, Sabine Erschen, Peter Kusstatscher, Christian Berg, Robert Krause, Tomislav Cernava, Gabriele Berg

Open access · goldAbstract read
In one paragraph

Article in Journal of advanced research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 21 citations in OpenAlex.

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  8. Applied microbiology of the phyllosphere.Applied microbiology and biotechnology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Wisnu Adi WicaksonoInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria. Electronic address: wisnu.wicaksono@tugraz.at.
Tamara Reisenhofer-GraberInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria. Electronic address: reisenhofer-graber@student.tugraz.at.
Sabine ErschenInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria. Electronic address: sabine.erschen@tugraz.at.
Peter KusstatscherInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria. Electronic address: peter.kusstatscher@tugraz.at.
Christian BergInstitute of Plant Sciences, Karl-Franzens-University, Graz, Austria. Electronic address: christian.berg@uni-graz.at.
Robert KrauseDepartment of Internal Medicine, Medical University of Graz, Graz, Austria; BioTechMed Graz, Inter-university Cooperation Platform, Graz, Austria. Electronic address: robert.krause@medunigraz.at.
Tomislav CernavaInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria; BioTechMed Graz, Inter-university Cooperation Platform, Graz, Austria. Electronic address: tomislav.cernava@tugraz.at.
Gabriele BergInstitute of Environmental Biotechnology, Graz University of Technology, Graz, Austria; BioTechMed Graz, Inter-university Cooperation Platform, Graz, Austria; Leibniz Institute for Agricultural Engineering and Bioeconomy Potsdam, Potsdam, Germany; Institute for Biochemistry and Biology, University of Potsdam, Potsdam, Germany. Electronic address: gabriele.berg@tugraz.at.
Graz University of Technology · ATBioTechMed-Graz · ATUniversity of Graz · AT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe plant microbiota is known to protect its host against invasion by plant pathogens. Recent studies have indicated that the microbiota of indoor plants is transmitted to the local built environment where it might fulfill yet unexplored functions. A better understanding of the interplay of such microbial communities with human pathogens might provide novel cues related to natural inhibition of them.

objectiveWe studied the plant microbiota of two model indoor plants, Musa acuminata and Chlorophytum comosum, and their effect on human pathogens. The main objective was to identify mechanisms by which the microbiota of indoor plants inhibits human-pathogenic bacteria.

methodsMicrobial communities and functioning were investigated using a comprehensive set of experiments and methods combining amplicon and shotgun metagenomic analyses with results from interaction assays.

resultsA diverse microbial community was found to be present on Musa and Chlorophytum grown in different indoor environments; the datasets comprised 1066 bacterial, 1261 fungal, and 358 archaeal ASVs. Bacterial communities were specific for each plant species, whereas fungal and archaeal communities were primarily shaped by the built environment. Sphingomonas and Bacillus were found to be prevalent components of a ubiquitous core microbiome in the two model plants; they are well-known for antagonistic activity towards plant pathogens. Interaction assays indicated that they can also antagonize opportunistic human pathogens. Moreover, the native plant microbiomes harbored a broad spectrum of biosynthetic gene clusters, and in parallel, a variety of antimicrobial resistance genes. By conducting comparative metagenomic analyses between plants and abiotic surfaces, we found that the phyllosphere microbiota harbors features that are clearly distinguishable from the surrounding abiotic surfaces.

conclusionsNaturally occurring phyllosphere bacteria can potentially act as a protective shield against opportunistic human pathogens. This knowledge and the underlying mechanisms can provide an important basis to establish a healthy microbiome in built environments.

Indexed as

BacillusMicrobiotaBacteriaHumansPlantsBuilt environmentHuman healthIndoor microbiomeIndoor plant microbiome

Identifiers

PMID36585101
PMCPMC9811327
OpenAlexW4212871058

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.