Evidence map›Paper›PMID 36584134›Full record

SynthesisPloS one2022

Publication bias in pharmacogenetics of adverse reaction to antiseizure drugs: An umbrella review and a meta-epidemiological study.

S Bally, J Cottin, M C Gagnieu, J C Lega, C Verstuyft, S Rheims, G Lesca, M Cucherat, Guillaume Grenet

Open access · goldAbstract readSystematic Review
In one paragraph

Synthesis in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.4field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

S BallyLaboratoire de Biométrie et Biologie Evolutive UMR5558, Université Lyon 1, CNRS, Villeurbanne, France.
J CottinService Hospitalo-Universitaire de Pharmacotoxicologie, Pôle de Santé Publique, Hospices Civils de Lyon, Lyon, France.
M C GagnieuLaboratoire de Pharmacologie, Groupement Hospitalier Sud, Hospices Civils De Lyon, Lyon, France.
J C LegaLaboratoire de Biométrie et Biologie Evolutive UMR5558, Université Lyon 1, CNRS, Villeurbanne, France.
C VerstuyftCESP, MOODS Team, INSERM, Faculté de Médecine, Université Paris-Saclay, Le Kremlin Bicêtre, France.
S RheimsDepartment of Functional Neurology and Epileptology, Hospices Civils de Lyon, Lyon 1 University, Lyon, France.
G LescaService de Génétique, Groupement Hospitalier Est, Hospices Civils De Lyon, Université Lyon 1, Lyon, France.
M CucheratLaboratoire de Biométrie et Biologie Evolutive UMR5558, Université Lyon 1, CNRS, Villeurbanne, France.ORCID 0000-0003-2150-5932
Guillaume GrenetService Hospitalo-Universitaire de Pharmacotoxicologie, Pôle de Santé Publique, Hospices Civils de Lyon, Lyon, France.ORCID 0000-0002-5237-2581
Université Claude Bernard Lyon 1 · FRHospices Civils de Lyon · FRInserm · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Publication bias may lead to a misestimation in the association between pharmacogenetic biomarkers (PGx) and antiseizure drug's adverse effects (AEs). We aimed to assess its prevalence in this field. We searched for systematic reviews assessing PGx of antiseizure drug's AEs. For each unique association between a PGx, a drug and its AE, we used the available odds ratio (ORs) to generate corresponding funnel plots. We estimated the prevalence of publication bias using visual inspections and asymmetry tests. We explored the impact of publication bias using ORs adjusted for potential publication bias. Twenty-two associations were available. Our visual analysis suggested a publication bias in five out twenty-two funnel plots (23% [95%CI: 8; 45]). The Egger's test showed a significant publication bias in one (HLA-B*15:02 and phenytoin-induced Stevens-Johnson syndrome or toxic epidermal necrolysis, p = 0.03) out of nine (11% [95%CI: 0; 48]) and the Begg's test in one (HLA-B*15:02 and carbamazepine-induced serious cutaneous reactions, p = 0.02) out of ten (10% [95%CI: 0; 45]) assessable funnel plots. Adjusting for publication bias may reduce by half the ORs of the pharmacogenetics associations. Publication bias in the pharmacogenetic of antiseizure drug's AEs is not uncommon and may affect the estimation of the effect of such biomarkers. When conducting pharmacogenetic studies, it is critical to publish also the negative one.

Indexed as

PharmacogeneticsStevens-Johnson SyndromeEpidemiologic StudiesHLA-B AntigensHumansPublication BiasSystematic Reviews as TopicHLA-B Antigens

Identifiers

PMID36584134
PMCPMC9803138
OpenAlexW4313306181

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.