Evidence map›Paper›PMID 36583373›Full record

ArticleEmerging microbes & infections2023

The regulation of cell homeostasis and antiviral innate immunity by autophagy during classical swine fever virus infection.

Xiaowen Li, Yiwan Song, Xinyan Wang, Cheng Fu, Feifan Zhao, Linke Zou, Keke Wu, Wenxian Chen, Zhaoyao Li, Jindai Fan and 8 more

RetractedErratum issuedOpen access · goldAbstract readRetracted Publication
In one paragraph

Article in Emerging microbes & infections, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
6.1field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 30 citations in OpenAlex.

  1. Virulence · 2026
    Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Strategies of Classical Swine Fever Immune Evasion.International journal of molecular sciences · 2025
    Review
  7. Article
  8. Article
  9. Article
  10. Frontiers in microbiology · 2025
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Anemoside B4, a new pyruvate carboxylase inhibitor, alleviates colitis by reprogramming macrophage function.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2024
    Article
  16. Article
  17. The Genetic Selection ofAnimals : an open access journal from MDPI · 2024
    Article
  18. Article
  19. International journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 2 institutions in 1 country.

Xiaowen LiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Yiwan SongCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Xinyan WangCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Cheng FuCollege of Animal Science & Technology, Zhongkai University of Agriculture and Engineering.
Feifan ZhaoCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Linke ZouCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Keke WuCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Wenxian ChenCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Zhaoyao LiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Jindai FanCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Yuwan LiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Bingke LiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Sen ZengCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Xiaodi LiuCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Mingqiu ZhaoCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Lin YiCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Jinding ChenCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
Shuangqi FanCollege of Veterinary Medicine, South China Agricultural University, Guangzhou, People's Republic of China.
South China Agricultural University · CNZhongkai University of Agriculture and Engineering · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

CSFV (classical swine fever virus) is currently endemic in developing countries in Asia and has recently re-emerged in Japan. Under the pressure of natural selection pressure, CSFV keeps evolving to maintain its ecological niche in nature. CSFV has evolved mechanisms that induce immune depression, but its pathogenic mechanism is still unclear. In this study, using transcriptomics and metabolomics methods, we found that CSFV infection alters innate host immunity by activating the interferon pathway, inhibiting host inflammation, apoptosis, and remodelling host metabolism in porcine alveolar macrophages. Moreover, we revealed that autophagy could alter innate immunity and metabolism induced by CSFV infection. Enhanced autophagy further inhibited CSFV-induced RIG-I-IRF3 signal transduction axis and JAK-STAT signalling pathway and blocked type I interferon production while reducing autophagy inhibition of the NF-κB signalling pathway and apoptosis in CSFV infection cells. Furthermore, the level of CSFV infection-induced glycolysis and the content of lactate and pyruvate, as well as 3-phosphoglyceraldehyde, a derivative of glycolysis converted to serine, was altered by autophagy. We also found that silencing HK2 (hexokinase 2), the rate-limiting enzyme of glycolytic metabolism, could induce autophagy but reduce the interferon signalling pathway, NF-κB signalling pathway, and inhibition of apoptosis induced by CSFV infection. In addition, inhibited cellular autophagy by silencing ATG5 or using 3-Methyladenine, could backfill the inhibitory effect of silencing HK2 on the cellular interferon signalling pathway, NF-κB signalling pathway, and apoptosis.

Indexed as

Classical Swine FeverClassical Swine Fever VirusImmunity, InnateAnimalsAutophagyHomeostasisInterferonsNF-kappa BSwineVirus ReplicationInterferonsNF-kappa BautophagyCSFVhexokinase 2innate immunitymetabolomicstranscriptomics

Identifiers

PMID36583373
PMCPMC9848339
OpenAlexW4313311697

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.