Evidence map›Paper›PMID 36583341›Full record

ArticleNucleic acids research2023

Polyribosomes of circular topology are prevalent in mammalian cells.

Timur N Baymukhametov, Dmitry N Lyabin, Yury M Chesnokov, Ivan I Sorokin, Evgeniya V Pechnikova, Alexander L Vasiliev, Zhanna A Afonina

Abstract read
In one paragraph

Article in Nucleic acids research, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Timur N BaymukhametovStructural biology department, National Research Center 'Kurchatov Institute', Moscow 123182, Russia.
Dmitry N LyabinInstitute of Protein Research RAS, Pushchino, Moscow Region 142290, Russia.ORCID 0000-0003-4605-8884
Yury M ChesnokovProbe and Electron Microscopy Resource Center, National Research Center 'Kurchatov Institute', Moscow 123182, Russia.
Ivan I SorokinInstitute of Protein Research RAS, Pushchino, Moscow Region 142290, Russia.
Evgeniya V PechnikovaProbe and Electron Microscopy Resource Center, National Research Center 'Kurchatov Institute', Moscow 123182, Russia.
Alexander L VasilievProbe and Electron Microscopy Resource Center, National Research Center 'Kurchatov Institute', Moscow 123182, Russia.
Zhanna A AfoninaInstitute of Protein Research RAS, Pushchino, Moscow Region 142290, Russia.ORCID 0000-0003-4496-0962

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyribosomes, the groups of ribosomes simultaneously translating a single mRNA molecule, are very common in both, prokaryotic and eukaryotic cells. Even in early EM studies, polyribosomes have been shown to possess various spatial conformations, including a ring-shaped configuration which was considered to be functionally important. However, a recent in situ cryo-ET analysis of predominant regular inter-ribosome contacts did not confirm the abundance of ring-shaped polyribosomes in a cell cytoplasm. To address this discrepancy, here we analyzed the cryo-ET structure of polyribosomes in diluted lysates of HeLa cells. It was shown that the vast majority of the ribosomes were combined into polysomes and were proven to be translationally active. Tomogram analysis revealed that circular polyribosomes are indeed very common in the cytoplasm, but they mostly possess pseudo-regular structures without specific inter-ribosomal contacts. Although the size of polyribosomes varied widely, most circular polysomes were relatively small in size (4-8 ribosomes). Our results confirm the recent data that it is cellular mRNAs with short ORF that most commonly form circular structures providing an enhancement of translation.

Indexed as

Protein BiosynthesisRibosomesHeLa CellsHumansMolecular ConformationPolyribosomesRNA, MessengerRNA, Messenger

Identifiers

PMID36583341
PMCPMC9881139

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.