Evidence map›Paper›PMID 36579125›Full record

ArticleInfection and drug resistance2022

CRISPRi-Mediated Gene Suppression Reveals Putative Reverse Transcriptase Gene PA0715 to Be a Global Regulator of

Dapeng Zhou, Guangtao Huang, Guangchao Xu, Lijuan Xiang, Siyi Huang, Xinchong Chen, Yixin Zhang, Dali Wang

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Infection and drug resistance, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Dapeng Zhou *Department of Burns and Plastic Surgery, Affiliated Hospital of Zunyi Medical University, Zunyi, People's Republic of China.ORCID 0000-0002-9692-7577
Guangtao Huang *Department of Burns and Plastic Surgery, Affiliated Hospital of Zunyi Medical University, Zunyi, People's Republic of China.
Guangchao XuDepartment of Burns and Plastic Surgery, Affiliated Hospital of Zunyi Medical University, Zunyi, People's Republic of China.
Lijuan XiangDepartment of Clinical Laboratory, Shenzhen Institute of Translational Medicine, The First Affiliated Hospital of Shenzhen University, Shenzhen Second People's Hospital, Shenzhen, People's Republic of China.
Siyi HuangDepartment of Burns and Plastic Surgery, Affiliated Hospital of Zunyi Medical University, Zunyi, People's Republic of China.ORCID 0000-0002-1862-4087
Xinchong ChenDepartment of Burns and Plastic Surgery, Affiliated Hospital of Zunyi Medical University, Zunyi, People's Republic of China.
Yixin ZhangDepartment of Plastic and Reconstructive Surgery, Shanghai Ninth People's Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, People's Republic of China.
Dali WangDepartment of Burns and Plastic Surgery, Affiliated Hospital of Zunyi Medical University, Zunyi, People's Republic of China.
Zunyi Medical University · CNShanghai Jiao Tong University · CNShenzhen Second People's Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Patients and Methods: The shuttle vector pHERD20T containing an arabinose inducible promoter was used to construct the CRISPRi system. Alterations in cellular physiology and bacterial pathogenicity of Results: We found that down-regulation of PA0715 significantly reduced PAO1 growth rate, motility and chemotaxis, antibiotic resistance, pyocyanin and biofilm production. In addition, PA0715 inhibition reduced the pathogenicity of PAO1 to the greater galleria mellonella larvae. Transcriptional profiling identified 1757 genes including those related to amino acid, carbohydrate, ketone body and organic salt metabolism, whose expression was directly or indirectly controlled by PA0715. Unexpectedly, genes involved in oxidative phosphorylation also varied with PA0715 levels, and these findings support a hitherto unrecognized critical role for PA0715 in oxidative respiration in Conclusion: We identified PA0715 as a global regulator of the metabolic network that is indispensable for the survival and reproduction of

Indexed as

antibiosisbioinformaticsCRISPRiP. aeruginosaprokaryotesreverse transcriptase

Identifiers

PMID36579125
PMCPMC9792118
OpenAlexW4312070251

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.