Evidence map›Paper›PMID 36578479›Full record

ArticleFrontiers in immunology2022

Using mass cytometry for the analysis of samples of the human airways.

Marianne Rocha-Hasler, Lena Müller, Anja Wagner, Aldine Tu, Victoria Stanek, Nicholas James Campion, Tina Bartosik, Mohammed Zghaebi, Slagjana Stoshikj, Daniela Gompelmann and 7 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 2 institutions in 2 countries.

Marianne Rocha-HaslerAllergology and Sinusitis Research Lab, Department of Otorhinolaryngology, Medical University of Vienna, Vienna, Austria.
Lena MüllerCore Facility Flow Cytometry & Department of Surgery, Research Lab, Medical University of Vienna, Vienna, Austria.
Anja WagnerCore Facility Proteomics, Medical University of Vienna, Vienna, Austria.
Aldine TuAllergology and Sinusitis Research Lab, Department of Otorhinolaryngology, Medical University of Vienna, Vienna, Austria.
Victoria StanekAllergology and Sinusitis Research Lab, Department of Otorhinolaryngology, Medical University of Vienna, Vienna, Austria.
Nicholas James CampionAllergology and Sinusitis Research Lab, Department of Otorhinolaryngology, Medical University of Vienna, Vienna, Austria.
Tina BartosikAllergology and Sinusitis Research Lab, Department of Otorhinolaryngology, Medical University of Vienna, Vienna, Austria.
Mohammed ZghaebiAllergology and Sinusitis Research Lab, Department of Otorhinolaryngology, Medical University of Vienna, Vienna, Austria.
Slagjana StoshikjDivision of Pulmonology, Department of Internal Medicine II, Medical University Vienna, Vienna, Austria.
Daniela GompelmannDivision of Pulmonology, Department of Internal Medicine II, Medical University Vienna, Vienna, Austria.
Andreas ZechDivision of Pulmonology, Department of Internal Medicine II, Medical University Vienna, Vienna, Austria.
Henrik MeiGerman Rheumatism Research Center Berlin, Berlin, Germany.
Klaus KratochwillCore Facility Proteomics, Medical University of Vienna, Vienna, Austria.
Andreas SpittlerCore Facility Flow Cytometry & Department of Surgery, Research Lab, Medical University of Vienna, Vienna, Austria.
Marco IdzkoDivision of Pulmonology, Department of Internal Medicine II, Medical University Vienna, Vienna, Austria.
Sven SchneiderAllergology and Sinusitis Research Lab, Department of Otorhinolaryngology, Medical University of Vienna, Vienna, Austria.
Julia Eckl-DornaAllergology and Sinusitis Research Lab, Department of Otorhinolaryngology, Medical University of Vienna, Vienna, Austria.
Medical University of Vienna · ATGerman Rheumatism Research Centre · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mass cytometry (MC) is a powerful method for mapping complex cellular systems at single-cell levels, based on the detection of cellular proteins. Numerous studies have been performed using human blood, but there is a lack of protocols describing the processing and labeling of bronchoalveolar lavage fluid (BALF) and nasal polyps (NP) for acquisition by MC. These specimens are essential in the investigation of immune cell characteristics in airway diseases such as asthma and chronic rhinosinusitis with NP (CRSwNP). Here we optimized a workflow for processing, labeling, and acquisition of BALF and NP cells by MC. Among three methods tested for NP digestion, combined enzymatic/mechanical processing yielded maximum cell recovery, viability and labeling patterns compared to the other methods. Treatment with DNAse improved sample acquisition by MC. In a final step, we performed a comparison of blood, BALF and NP cell composition using a 31-marker MC antibody panel, revealing expected differences between the different tissue but also heterogeneity among the BALF and NP samples. We here introduce an optimized workflow for the MC analysis of human NP and BALF, which enables comparative analysis of different samples in larger cohorts. A deeper understanding of immune cell characteristics in these samples may guide future researchers and clinicians to a better disease management.

Indexed as

AsthmaNasal PolypsSinusitisHumansantibody titrationasthmaBALFCRSwNPCyTOFmass cytometrynasal polyptissue digestion

Identifiers

PMID36578479
PMCPMC9791368
OpenAlexW4312126066

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.