Evidence map›Paper›PMID 36578086›Full record

ReviewBiotechnology for biofuels and bioproducts2022

Structure and function of aldopentose catabolism enzymes involved in oxidative non-phosphorylative pathways.

Yaxin Ren, Veikko Eronen, Martina Blomster Andberg, Anu Koivula, Nina Hakulinen

Abstract readReview
In one paragraph

Review in Biotechnology for biofuels and bioproducts, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yaxin RenDepartment of Chemistry, University of Eastern Finland, 111, 80101, Joensuu, Finland.
Veikko EronenDepartment of Chemistry, University of Eastern Finland, 111, 80101, Joensuu, Finland.
Martina Blomster AndbergVTT Technical Research Centre of Finland Ltd, Espoo, Finland.
Anu KoivulaVTT Technical Research Centre of Finland Ltd, Espoo, Finland.
Nina HakulinenDepartment of Chemistry, University of Eastern Finland, 111, 80101, Joensuu, Finland. nina.hakulinen@uef.fi.

Funding

Academy of Finland 322619
6 · The paper itself

Abstract

Platform chemicals and polymer precursors can be produced via enzymatic pathways starting from lignocellulosic waste materials. The hemicellulose fraction of lignocellulose contains aldopentose sugars, such as D-xylose and L-arabinose, which can be enzymatically converted into various biobased products by microbial non-phosphorylated oxidative pathways. The Weimberg and Dahms pathways convert pentose sugars into α-ketoglutarate, or pyruvate and glycolaldehyde, respectively, which then serve as precursors for further conversion into a wide range of industrial products. In this review, we summarize the known three-dimensional structures of the enzymes involved in oxidative non-phosphorylative pathways of pentose catabolism. Key structural features and reaction mechanisms of a diverse set of enzymes responsible for the catalytic steps in the reactions are analysed and discussed.

Indexed as

AldolaseAldopentoseAldose-1-dehydrogenaseKetoglutarate-semialdehyde dehydrogenaseLactonaseNon-phosphorylative pathwaysPentose catabolismSugar acid dehydratase

Identifiers

PMID36578086
PMCPMC9795676

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.