Evidence map›Paper›PMID 36577137›Full record

ArticleBlood2023

HOXA9 forms a repressive complex with nuclear matrix-associated protein SAFB to maintain acute myeloid leukemia.

Shuchi Agrawal-Singh, Jaana Bagri, George Giotopoulos, Dhoyazan M A Azazi, Sarah J Horton, Cecile K Lopez, Shubha Anand, Anne-Sophie Bach, Frances Stedham, Robin Antrobus and 6 more

Open access · greenAbstract read
In one paragraph

Article in Blood, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.1field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 14 citations in OpenAlex.

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  10. Aberrant stem cell and developmental programs in pediatric leukemia.Frontiers in cell and developmental biology · 2024
    Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 6 institutions in 2 countries.

Shuchi Agrawal-SinghWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.ORCID 0000-0001-8632-4556
Jaana BagriWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.ORCID 0000-0002-2450-8226
George GiotopoulosWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.ORCID 0000-0003-1390-6592
Dhoyazan M A AzaziWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.ORCID 0000-0001-9085-4031
Sarah J HortonWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.ORCID 0000-0001-8418-5783
Cecile K LopezWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.
Shubha AnandCancer Molecular Diagnostics Laboratory, Cancer Research UK Cambridge Centre, Cambridge, United Kingdom.
Anne-Sophie BachWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.
Frances StedhamWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.
Robin AntrobusCambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom.
Jack W HoughtonCambridge Institute for Medical Research, University of Cambridge, Cambridge, United Kingdom.
George S VassiliouWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.ORCID 0000-0003-4337-8022
Daniel SascaDepartment of Hematology, Oncology and Pneumology, University Medical Center Mainz, Mainz, Germany.ORCID 0000-0003-0330-7959
Haiyang YunDepartment of Medicine V, Hematology, Oncology and Rheumatology, University of Heidelberg, Heidelberg, Germany.ORCID 0000-0001-8714-205X
Anthony D WhettonSchool of Veterinary Medicine, School of Biosciences and Medicine, University of Surrey, Guildford, Surrey, United Kingdom.ORCID 0000-0002-1098-3878
Brian J P HuntlyWellcome Trust-MRC Cambridge Stem Cell Institute, Cambridge, United Kingdom.ORCID 0000-0003-0312-161X
Wellcome/MRC Cambridge Stem Cell Institute · GBUniversity of Cambridge · GBCancer Research UK Cambridge Center · GBHeidelberg University · DEJohannes Gutenberg University Mainz · DEUniversity of Surrey · GB

Funding

Cancer Research UK 23015Cancer Research UK 25508Cancer Research UK DRCRPG-NOV22/100014Medical Research Council MR/R009708/1Wellcome Trust
6 · The paper itself

Abstract

HOXA9 is commonly upregulated in acute myeloid leukemia (AML), in which it confers a poor prognosis. Characterizing the protein interactome of endogenous HOXA9 in human AML, we identified a chromatin complex of HOXA9 with the nuclear matrix attachment protein SAFB. SAFB perturbation phenocopied HOXA9 knockout to decrease AML proliferation, increase differentiation and apoptosis in vitro, and prolong survival in vivo. Integrated genomic, transcriptomic, and proteomic analyses further demonstrated that the HOXA9-SAFB (H9SB)-chromatin complex associates with nucleosome remodeling and histone deacetylase (NuRD) and HP1γ to repress the expression of factors associated with differentiation and apoptosis, including NOTCH1, CEBPδ, S100A8, and CDKN1A. Chemical or genetic perturbation of NuRD and HP1γ-associated catalytic activity also triggered differentiation, apoptosis, and the induction of these tumor-suppressive genes. Importantly, this mechanism is operative in other HOXA9-dependent AML genotypes. This mechanistic insight demonstrates the active HOXA9-dependent differentiation block as a potent mechanism of disease maintenance in AML that may be amenable to therapeutic intervention by targeting the H9SB interface and/or NuRD and HP1γ activity.

Indexed as

Leukemia, Myeloid, AcuteMatrix Attachment Region Binding ProteinsChromatinHomeodomain ProteinsHumansNuclear Matrix-Associated ProteinsProteomicsReceptors, EstrogenTranscription FactorsChromatinHomeodomain ProteinsMatrix Attachment Region Binding ProteinsNuclear Matrix-Associated ProteinsReceptors, EstrogenSAFB protein, humanTranscription Factors

Identifiers

PMID36577137
PMCPMC10113176
OpenAlexW4313277716

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.