Evidence map›Paper›PMID 36577119›Full record

ArticleJournal of the American Chemical Society2023

Functionalized DNA-Origami-Protein Nanopores Generate Large Transmembrane Channels with Programmable Size-Selectivity.

Qi Shen, Qiancheng Xiong, Kaifeng Zhou, Qingzhou Feng, Longfei Liu, Taoran Tian, Chunxiang Wu, Yong Xiong, Thomas J Melia, C Patrick Lusk and 1 more

Abstract read
In one paragraph

Article in Journal of the American Chemical Society, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Membrane-Associated Biomolecules for Synthetic Cell Signalling.Chembiochem : a European journal of chemical biology · 2026
    Review
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. Native globular ferritin nanopore sensor.Nature communications · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Qi ShenDepartment of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States.ORCID 0000-0002-9062-8955
Qiancheng XiongDepartment of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States.ORCID 0000-0002-9897-7391
Kaifeng ZhouDepartment of Molecular Biophysics and Biochemistry, Yale University, 266 Whitney Avenue, New Haven, Connecticut 06511, United States.
Qingzhou FengDepartment of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States.
Longfei LiuDepartment of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States.ORCID 0000-0002-5760-2964
Taoran TianDepartment of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States.
Chunxiang WuDepartment of Molecular Biophysics and Biochemistry, Yale University, 266 Whitney Avenue, New Haven, Connecticut 06511, United States.ORCID 0000-0002-8635-1578
Yong XiongDepartment of Molecular Biophysics and Biochemistry, Yale University, 266 Whitney Avenue, New Haven, Connecticut 06511, United States.ORCID 0000-0001-9625-9313
Thomas J MeliaDepartment of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States.
C Patrick LuskDepartment of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States.ORCID 0000-0003-4703-0533
Chenxiang LinDepartment of Cell Biology, Yale School of Medicine, 333 Cedar Street, New Haven, Connecticut 06520, United States.ORCID 0000-0001-7041-1946

Funding

Project 3. IntegrationU54AI170791 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Barbie K. Ganser-Pornillos · 2022 to 2026
$30.6M
Technology Development 2: MAS NMR and dynamic nuclear polarization for HIV-1 structural biologyP50AI150481 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI GRONENBORN, ANGELA M. · 2019 to 2021
$14.1M
Regulation of Autophagosome Membrane Dynamics by the AtgB Family of ProteinsR01GM100930 · NIGMS · YALE UNIVERSITY · PI MELIA, THOMAS JAMES · 2013 to 2024
$5.4M
The mechanism of ESCRT-mediated surveillance of the nuclear envelope barrierR01GM105672 · NIGMS · YALE UNIVERSITY · PI LUSK, CHARLES PATRICK · 2013 to 2025
$4.6M
A multiscale approach for elucidating nuclear entry mechanisms of HIV-1 capsidR01AI162260 · NIAID · YALE UNIVERSITY · PI LIN, CHENXIANG, XIONG, YONG · 2021 to 2025
$3.5M
A Nanomechanical Toolkit to Guide Membrane Structure and DynamicsR01GM132114 · NIGMS · YALE UNIVERSITY · PI LIN, CHENXIANG · 2019 to 2022
$1.3M
Generating nuclear pore complex mimics with DNA origamiR21GM109466 · NIGMS · YALE UNIVERSITY · PI LIN, CHENXIANG, LUSK, CHARLES PATRICK · 2014 to 2015
$458k
NIAID NIH HHS P50 AI150481NIAID NIH HHS R01 AI162260NIAID NIH HHS U54 AI170791NIGMS NIH HHS R01 GM100930NIGMS NIH HHS R01 GM105672NIGMS NIH HHS R01 GM132114NIGMS NIH HHS R21 GM109466
6 · The paper itself

Abstract

The DNA-origami technique has enabled the engineering of transmembrane nanopores with programmable size and functionality, showing promise in building biosensors and synthetic cells. However, it remains challenging to build large (>10 nm), functionalizable nanopores that spontaneously perforate lipid membranes. Here, we take advantage of pneumolysin (PLY), a bacterial toxin that potently forms wide ring-like channels on cell membranes, to construct hybrid DNA-protein nanopores. This PLY-DNA-origami complex, in which a DNA-origami ring corrals up to 48 copies of PLY, targets the cholesterol-rich membranes of liposomes and red blood cells, readily forming uniformly sized pores with an average inner diameter of ∼22 nm. Such hybrid nanopores facilitate the exchange of macromolecules between perforated liposomes and their environment, with the exchange rate negatively correlating with the macromolecule size (diameters of gyration: 8-22 nm). Additionally, the DNA ring can be decorated with intrinsically disordered nucleoporins to further restrict the diffusion of traversing molecules, highlighting the programmability of the hybrid nanopores. PLY-DNA pores provide an enabling biophysical tool for studying the cross-membrane translocation of ultralarge molecules and open new opportunities for analytical chemistry, synthetic biology, and nanomedicine.

Indexed as

NanoporesCell MembraneDiffusionDNALiposomesDNALiposomes

Identifiers

PMID36577119
PMCPMC9852090

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.