Evidence map›Paper›PMID 36574653›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Breast cancer patient-derived whole-tumor cell culture model for efficient drug profiling and treatment response prediction.

Xinsong Chen, Emmanouil G Sifakis, Stephanie Robertson, Shi Yong Neo, Seong-Hwan Jun, Le Tong, Apple Tay Hui Min, John Lövrot, Roxanna Hellgren, Sara Margolin and 6 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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  10. A phenotypic screening approach to target p60AmotL2-expressing invasive cancer cells.Journal of experimental & clinical cancer research : CR · 2024
    Article
  11. Article
  12. Review
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  14. Breast cancer patient-derived whole-tumor cell culture model for efficient drug profiling and treatment response prediction.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Xinsong ChenDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.ORCID 0000-0002-3214-9075
Emmanouil G SifakisDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.ORCID 0000-0001-9919-4471
Stephanie RobertsonDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.
Shi Yong NeoDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.
Seong-Hwan JunDepartment of Computational Biology, Royal Institute of Technology, Science for Life Laboratory, Stockholm 17165, Sweden.
Le TongDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.
Apple Tay Hui MinDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.ORCID 0000-0002-0600-6599
John LövrotDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.ORCID 0000-0002-9339-8059
Roxanna HellgrenDepartment of Breast Imaging, Södersjukhuset, Stockholm 11828, Sweden.ORCID 0000-0003-4234-8323
Sara MargolinDepartment of Clinical Science and Education, Södersjukhuset, Karolinska Institutet, Stockholm 11883, Sweden.
Jonas BerghDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.
Theodoros FoukakisDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.ORCID 0000-0001-8952-9987
Jens LagergrenDepartment of Computational Biology, Royal Institute of Technology, Science for Life Laboratory, Stockholm 17165, Sweden.ORCID 0000-0002-4552-0240
Andreas LundqvistDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.
Ran MaDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.
Johan HartmanDepartment of Oncology-Pathology, Karolinska Institutet, Stockholm 17164, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Breast cancer (BC) is a complex disease comprising multiple distinct subtypes with different genetic features and pathological characteristics. Although a large number of antineoplastic compounds have been approved for clinical use, patient-to-patient variability in drug response is frequently observed, highlighting the need for efficient treatment prediction for individualized therapy. Several patient-derived models have been established lately for the prediction of drug response. However, each of these models has its limitations that impede their clinical application. Here, we report that the whole-tumor cell culture (WTC) ex vivo model could be stably established from all breast tumors with a high success rate (98 out of 116), and it could reassemble the parental tumors with the endogenous microenvironment. We observed strong clinical associations and predictive values from the investigation of a broad range of BC therapies with WTCs derived from a patient cohort. The accuracy was further supported by the correlation between WTC-based test results and patients' clinical responses in a separate validation study, where the neoadjuvant treatment regimens of 15 BC patients were mimicked. Collectively, the WTC model allows us to accomplish personalized drug testing within 10 d, even for small-sized tumors, highlighting its potential for individualized BC therapy. Furthermore, coupled with genomic and transcriptomic analyses, WTC-based testing can also help to stratify specific patient groups for assignment into appropriate clinical trials, as well as validate potential biomarkers during drug development.

Indexed as

Antineoplastic AgentsBreast NeoplasmsBiomarkersCell Culture TechniquesFemaleGene Expression ProfilingHumansTumor MicroenvironmentAntineoplastic AgentsBiomarkersbreast cancerdrug profilingex vivo cultureprecision oncologywhole-tumor cell culture

Identifiers

PMID36574653
PMCPMC9910599

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.