Evidence map›Paper›PMID 36573357›Full record

ArticleMolecular systems biology2023

Vertical and horizontal gene transfer tradeoffs direct plasmid fitness.

Jonathan H Bethke, Helena R Ma, Ryan Tsoi, Li Cheng, Minfeng Xiao, Lingchong You

Abstract read
In one paragraph

Article in Molecular systems biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Transfer potential of F-like plasmids inISME communications · 2026
    Article
  11. Article
  12. Review
  13. Article
  14. The extended mobility of plasmids.Nucleic acids research · 2025
    Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. The metabolic burden associated with plasmid acquisition: An assessment of the unrecognized benefits to host cells.BioEssays : news and reviews in molecular, cellular and developmental biology · 2025
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Jonathan H BethkeDepartment of Molecular Genetics and Microbiology, Duke University, NC, Durham, USA.ORCID 0000-0002-9900-2369
Helena R MaDepartment of Biomedical Engineering, Duke University, NC, Durham, USA.ORCID 0000-0003-3659-7948
Ryan TsoiDepartment of Biomedical Engineering, Duke University, NC, Durham, USA.
Li ChengBGI-Shenzhen, Shenzhen, China.
Minfeng XiaoBGI-Shenzhen, Shenzhen, China.ORCID 0000-0002-0507-7352
Lingchong YouDepartment of Molecular Genetics and Microbiology, Duke University, NC, Durham, USA.ORCID 0000-0003-3725-4007

Funding

Post-antibiotic effect and design of optimal antibiotic dosing protocolsR01GM098642 · NIGMS · DUKE UNIVERSITY · PI YOU, LINGCHONG · 2011 to 2025
$3.6M
Tradeoffs between fitness costs and transfer rates in horizontal gene transferR01AI125604 · NIAID · DUKE UNIVERSITY · PI LINGCHONG YOU · 2017 to 2026
$3.3M
Targeted control of self-transmissible plasmids by using engineered interfering plasmidsR01EB031869 · NIBIB · DUKE UNIVERSITY · PI YOU, LINGCHONG · 2021 to 2024
$1.5M
NIAID NIH HHS R01 AI125604NIBIB NIH HHS R01 EB031869NIGMS NIH HHS R01 GM098642
6 · The paper itself

Abstract

Plasmid fitness is directed by two orthogonal processes-vertical transfer through cell division and horizontal transfer through conjugation. When considered individually, improvements in either mode of transfer can promote how well a plasmid spreads and persists. Together, however, the metabolic cost of conjugation could create a tradeoff that constrains plasmid evolution. Here, we present evidence for the presence, consequences, and molecular basis of a conjugation-growth tradeoff across 40 plasmids derived from clinical Escherichia coli pathogens. We discover that most plasmids operate below a conjugation efficiency threshold for major growth effects, indicating strong natural selection for vertical transfer. Below this threshold, E. coli demonstrates a remarkable growth tolerance to over four orders of magnitude change in conjugation efficiency. This tolerance fades as nutrients become scarce and horizontal transfer attracts a greater share of host resources. Our results provide insight into evolutionary constraints directing plasmid fitness and strategies to combat the spread of antibiotic resistance.

Indexed as

Escherichia coliGene Transfer, HorizontalAnti-Bacterial AgentsDrug Resistance, MicrobialPlasmidsAnti-Bacterial Agentsconjugationfitnessplasmidresistancetradeoff

Identifiers

PMID36573357
PMCPMC9912019

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.