Evidence map›Paper›PMID 36572560›Full record

ArticleMolecules and cells2022

Glycogen Synthase Kinase-3 Interaction Domain Enhances Phosphorylation of SARS-CoV-2 Nucleocapsid Protein.

Jun Seop Yun, Hyeeun Song, Nam Hee Kim, So Young Cha, Kyu Ho Hwang, Jae Eun Lee, Cheol-Hee Jeong, Sang Hyun Song, Seonghun Kim, Eunae Sandra Cho and 2 more

Open access · diamondAbstract read
In one paragraph

Article in Molecules and cells, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.6field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 17 citations in OpenAlex.

  1. CMGC Kinases in Viral Infection and Human Disease.Pathogens (Basel, Switzerland) · 2026
    Review
  2. Article
  3. Article
  4. Evolution of a fuzzy ribonucleoprotein complex in viral assembly.bioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Frontiers in immunology · 2024
    Article
  11. Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 1 institution in 1 country.

Jun Seop YunDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0002-2166-7539
Hyeeun SongDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0003-0132-769X
Nam Hee KimDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0002-3087-5276
So Young ChaDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0002-2810-3883
Kyu Ho HwangDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0002-8143-1640
Jae Eun LeeDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0001-6859-9193
Cheol-Hee JeongDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0003-1260-076X
Sang Hyun SongDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0003-0096-0530
Seonghun KimDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0003-3338-1156
Eunae Sandra ChoDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0002-0820-3019
Hyun Sil KimDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0003-3614-1764
Jong In YookDepartment of Oral Pathology, Yonsei University College of Dentistry, Seoul 03722, Korea.ORCID https://orcid.org/0000-0002-7318-6112
Yonsei University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A structural protein of SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2), nucleocapsid (N) protein is phosphorylated by glycogen synthase kinase (GSK)-3 on the serine/arginine (SR) rich motif located in disordered regions. Although phosphorylation by GSK-3β constitutes a critical event for viral replication, the molecular mechanism underlying N phosphorylation is not well understood. In this study, we found the putative alpha-helix L/FxxxL/AxxRL motif known as the GSK-3 interacting domain (GID), found in many endogenous GSK-3β binding proteins, such as Axins, FRATs, WWOX, and GSKIP. Indeed, N interacts with GSK-3β similarly to Axin, and Leu to Glu substitution of the GID abolished the interaction, with loss of N phosphorylation. The N phosphorylation is also required for its structural loading in a virus-like particle (VLP). Compared to other coronaviruses, N of Sarbecovirus lineage including bat RaTG13 harbors a CDK1-primed phosphorylation site and Gly-rich linker for enhanced phosphorylation by GSK-3β. Furthermore, we found that the S202R mutant found in Delta and R203K/G204R mutant found in the Omicron variant allow increased abundance and hyper-phosphorylation of N. Our observations suggest that GID and mutations for increased phosphorylation in N may have contributed to the evolution of variants.

Indexed as

Glycogen Synthase Kinase 3Nucleocapsid ProteinsSARS-CoV-2HumansPhosphorylationGlycogen Synthase Kinase 3Nucleocapsid ProteinsAxinDelta and Omicron variantsglycogen synthase kinase-3nucleocapsidphosphorylationsevere acute respiratory syndrome coronavirus 2

Identifiers

PMID36572560
PMCPMC9794558
OpenAlexW4312218409

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.