Evidence map›Paper›PMID 36571714›Full record

ArticleUrolithiasis2022

The effect of ALPL gene polymorphism on the development of urolithiasis in the Turkish population.

Altundag İbrahim, Guzel Tanoglu Esra, Genc Yavuz Burcu, Yalcinkaya Burhanettin, Yürek Emrah, Çolak Şahin

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Article in Urolithiasis, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 citations in OpenAlex.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Altundag İbrahimDepartment of Emergency Medicine, Başakşehir Çam and Sakura City Hospital, University of Health Sciences, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-0880-7218
Guzel Tanoglu EsraDepartment of Molecular Biology and Genetics, University of Health Sciences, Institute of Health Sciences, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-0909-8935
Genc Yavuz BurcuDepartment of Emergency Medicine, Haydarpasa Numune Training and Research Hospital, University of Health Sciences, Tıbbiye Caddesi Üsküdar, Istanbul, Turkey. drbgenc@gmail.com.ORCID http://orcid.org/0000-0001-6693-5288
Yalcinkaya BurhanettinTUBITAK National Metrology Institute, Kocaeli, Turkey.ORCID http://orcid.org/0000-0002-3744-6634
Yürek EmrahDepartment of Emergency Medicine Kanuni Training and Research Hospital, University of Health Sciences, Istanbul, Turkey.ORCID http://orcid.org/0000-0002-9495-5056
Çolak ŞahinDepartment of Emergency Medicine, Haydarpasa Numune Training and Research Hospital, University of Health Sciences, Tıbbiye Caddesi Üsküdar, Istanbul, Turkey.ORCID http://orcid.org/0000-0001-8192-9652
Sağlık Bilimleri Üniversitesi · TRHaydarpaşa Numune Eğitim ve Araştırma Hastanesi · TRTübitak National Metrology Institute · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Urinary system stones have a complex pathophysiology affected by environmental and genetic factors. To confirm whether ALPL gene polymorphisms are an effective universal risk factor for the development of urolithiasis, we aimed to investigate ALPL gene polymorphism in Turkish population. Our study was carried out with 187 patients with urolithiasis and 92 healthy volunteers (control group) who were not diagnosed with urolithiasis either in themselves or in their families, applied to Emergency Medicine Clinic of Health Sciences University Haydarpasa Numune Training and Research Hospital in Istanbul, Turkey between November 2021 and February 2022, prospectively. In order to evaluate the relationship between ALP gene (rs1256328) polymorphism and urolithiasis, blood samples were analyzed by quantitative Real Time PCR (qPCR) method.  Male gender (OR:3.785; 95% CI:2.118-6.763; p<0.001), increased BUN level (OR:1.082; 95% CI:1.013-1.156; p=0.019), increased NLR level (OR:1.149; 95 %CI:1.033-1.277; p=0.011) and heterozygous genotype (OR:2.353; 95% CI:1.31-4.225; p=0.004) were determined as independent risk factors for the development of urolithiasis. The presence of heterozygous (CT) genotype in the ALPL rs1256328 gene region in the Turkish population is associated with an increased risk of urolithiasis. This suggests that ALPL rs1256328 gene polymorphism can be used as a genetic marker in the Turkish population.

Indexed as

Urinary CalculiUrolithiasisAlkaline PhosphataseCase-Control StudiesGene FrequencyGenetic Predisposition to DiseaseGenotypeHumansMalePolymorphism, GeneticPolymorphism, Single NucleotideTurkeyAlkaline PhosphataseALPL protein, humanALPLGene polymorphismNephrolithiasisPCRqPCRReal time polymerase chain reactionrs1256328Urolithiasis

Identifiers

PMID36571714
OpenAlexW4312199591

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.