Evidence map›Paper›PMID 36571579›Full record

ArticleThe Journal of cell biology2023

A covalently linked probe to monitor local membrane properties surrounding plasma membrane proteins.

Miwa Umebayashi, Satoko Takemoto, Luc Reymond, Mayya Sundukova, Ruud Hovius, Annalisa Bucci, Paul A Heppenstall, Hideo Yokota, Kai Johnsson, Howard Riezman

Open access · greenAbstract read
In one paragraph

Article in The Journal of cell biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 6 institutions in 5 countries.

Miwa UmebayashiDepartment of Biochemistry and National Centre for Competence in Research in Chemical Biology, Sciences II, University of Geneva, Geneva, Switzerland.ORCID 0000-0002-5873-8417
Satoko TakemotoImage Processing Research Team, RIKEN Centre for Advanced Photonics, Wako, Japan.ORCID 0000-0003-0258-6589
Luc ReymondEcole Polytechnique Fédérale de Lausanne, Institute of Chemical Sciences and Engineering (ISIC), Institute of Bioengineering, National Centre of Competence in Research (NCCR) in Chemical Biology, Lausanne, Switzerland.ORCID 0000-0001-5282-9273
Mayya SundukovaEpigenetics and Neurobiology Unit, European Molecular Biology Laboratory Rome, Monterotondo, Italy.ORCID 0000-0003-1328-0008
Ruud HoviusEcole Polytechnique Fédérale de Lausanne, Institute of Chemical Sciences and Engineering (ISIC), Institute of Bioengineering, National Centre of Competence in Research (NCCR) in Chemical Biology, Lausanne, Switzerland.ORCID 0000-0001-9258-6587
Annalisa BucciEpigenetics and Neurobiology Unit, European Molecular Biology Laboratory Rome, Monterotondo, Italy.ORCID 0000-0002-6955-2204
Paul A HeppenstallEpigenetics and Neurobiology Unit, European Molecular Biology Laboratory Rome, Monterotondo, Italy.ORCID 0000-0001-7954-5166
Hideo YokotaImage Processing Research Team, RIKEN Centre for Advanced Photonics, Wako, Japan.ORCID 0000-0003-1395-309X
Kai JohnssonDepartment of Chemical Biology, Max Planck Institute for Medical Research, Heidelberg, Germany.ORCID 0000-0002-8002-1981
Howard RiezmanDepartment of Biochemistry and National Centre for Competence in Research in Chemical Biology, Sciences II, University of Geneva, Geneva, Switzerland.ORCID 0000-0003-4680-9422
École Polytechnique Fédérale de Lausanne · CHEuropean Molecular Biology Laboratory · ITRIKEN Center for Advanced Photonics · JPUniversity of Geneva · CHMax Planck Institute for Medical Research · DEUniversity of the Basque Country · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Functional membrane proteins in the plasma membrane are suggested to have specific membrane environments that play important roles to maintain and regulate their function. However, the local membrane environments of membrane proteins remain largely unexplored due to the lack of available techniques. We have developed a method to probe the local membrane environment surrounding membrane proteins in the plasma membrane by covalently tethering a solvatochromic, environment-sensitive dye, Nile Red, to a GPI-anchored protein and the insulin receptor through a flexible linker. The fluidity of the membrane environment of the GPI-anchored protein depended upon the saturation of the acyl chains of the lipid anchor. The local environment of the insulin receptor was distinct from the average plasma membrane fluidity and was quite dynamic and heterogeneous. Upon addition of insulin, the local membrane environment surrounding the receptor specifically increased in fluidity in an insulin receptor-kinase dependent manner and on the distance between the dye and the receptor.

Indexed as

Cell MembraneMembrane ProteinsReceptor, InsulinGlycosylphosphatidylinositolsGPI-Linked ProteinsMolecular Probe TechniquesGlycosylphosphatidylinositolsGPI-Linked ProteinsMembrane ProteinsReceptor, Insulin

Identifiers

PMID36571579
PMCPMC9802683
OpenAlexW4312179628

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.