Evidence map›Paper›PMID 36570940›Full record

ArticleFrontiers in plant science2022

Using phenomics to identify and integrate traits of interest for better-performing common beans: A validation study on an interspecific hybrid and its Acutifolii parents.

Diego Felipe Conejo Rodriguez, Milan Oldřich Urban, Marcela Santaella, Javier Mauricio Gereda, Aquiles Darghan Contreras, Peter Wenzl

Abstract read
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Article in Frontiers in plant science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

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0cells of the map it votes in
4citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Omics Technologies in Molecular Biology.International journal of molecular sciences · 2026
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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Diego Felipe Conejo RodriguezGenetic Resources Program, International Center for Tropical Agriculture (CIAT), Recta Cali-Palmira, Valle del Cauca, Colombia.
Milan Oldřich UrbanBean Physiology and Breeding Program, International Center for Tropical Agriculture, Recta Cali-Palmira, Valle del Cauca, Colombia.
Marcela SantaellaGenetic Resources Program, International Center for Tropical Agriculture (CIAT), Recta Cali-Palmira, Valle del Cauca, Colombia.
Javier Mauricio GeredaGenetic Resources Program, International Center for Tropical Agriculture (CIAT), Recta Cali-Palmira, Valle del Cauca, Colombia.
Aquiles Darghan ContrerasDepartment of Agronomy, Faculty of Agricultural Sciences, Universidad Nacional de Colombia, Bogotá, Colombia.
Peter WenzlGenetic Resources Program, International Center for Tropical Agriculture (CIAT), Recta Cali-Palmira, Valle del Cauca, Colombia.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Evaluations of interspecific hybrids are limited, as classical genebank accession descriptors are semi-subjective, have qualitative traits and show complications when evaluating intermediate accessions. However, descriptors can be quantified using recognized phenomic traits. This digitalization can identify phenomic traits which correspond to the percentage of parental descriptors remaining expressed/visible/measurable in the particular interspecific hybrid. In this study, a line of Methodology: Three accessions and one derived breeding line originating from their interspecific crosses were characterized and classified by selected phenomic descriptors using multivariate and machine learning techniques. The phenomic proportions of the interspecific hybrid (line INB 47) with respect to its three parent accessions were determined using a random forest and a respective confusion matrix. Results: The seed and pod morphometric traits, physiological behavior and yield performance were evaluated. In the classification of the accession, the phenomic descriptors with highest prediction force were Fm', Fo', Fs', LTD, Chl, seed area, seed height, seed Major, seed MinFeret, seed Minor, pod AR, pod Feret, pod round, pod solidity, pod area, pod major, pod seed weight and pod weight. Physiological traits measured in the interspecific hybrid present 2.2% similarity with the Conclusions: Here we were able to determine the phenomic proportions of individual parents in their interspecific hybrid accession. After some careful generalization the methodology can be used to: i) verify trait-of-interest transfer from

Indexed as

image analysisinterspecific hybridmachine learningphenomic descriptorsphenomic proportions

Identifiers

PMID36570940
PMCPMC9773562

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.