Evidence map›Paper›PMID 36569888›Full record

ArticleFrontiers in immunology2022

Chickens, more than humans, focus the diversity of their immunoglobulin genes on the complementarity-determining region but utilise amino acids, indicative of a more cross-reactive antibody repertoire.

Jessica Mallaby, Joseph Ng, Alex Stewart, Emma Sinclair, Deborah Dunn-Walters, Uri Hershberg

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

  1. Gut microbes · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Jessica MallabyDepartment of Bioscience and Medicine, University of Surrey, Guildford, United Kingdom.
Joseph NgRandall Centre for Cell and Molecular Biophysics, King's College London, London, United Kingdom.
Alex StewartDepartment of Bioscience and Medicine, University of Surrey, Guildford, United Kingdom.
Emma SinclairDepartment of Bioscience and Medicine, University of Surrey, Guildford, United Kingdom.
Deborah Dunn-WaltersDepartment of Bioscience and Medicine, University of Surrey, Guildford, United Kingdom.
Uri HershbergDepartment of Human Biology, University of Haifa, Haifa, Israel.
University of Surrey · GBKing's College London · GBUniversity of Haifa · IL

Funding

Biotechnology and Biological Sciences Research Council BBS/E/I/00007030Biotechnology and Biological Sciences Research Council BBS/E/I/00007038Biotechnology and Biological Sciences Research Council BBS/E/I/00007039Biotechnology and Biological Sciences Research Council BBS/OS/000015Biotechnology and Biological Sciences Research Council BB/T002212/1Medical Research Council MR/L01257X/1
6 · The paper itself

Abstract

The mechanisms of B-cell diversification differ greatly between aves and mammals, but both produce B cells and antibodies capable of supporting an effective immune response. To see how differences in the generation of diversity might affect overall repertoire diversity, we have compared the diversity characteristics of immunoglobulin genes from domestic chickens to those from humans. Both use V(D)J gene rearrangement and somatic hypermutation, but only chickens use somatic gene conversion. A range of diversity analysis tools were used to investigate multiple aspects of amino acid diversity at both the germline and repertoire levels. The effect of differing amino acid usages on antibody characteristics was assessed. At both the germline and repertoire levels, chickens exhibited lower amino acid diversity in comparison to the human immunoglobulin genes, especially outside of the complementarity-determining region (CDR). Chickens were also found to possess much larger and more hydrophilic CDR3s with a higher predicted protein binding potential, suggesting that the antigen-binding site in chicken antibodies is more flexible and more polyreactive than that seen in human antibodies.

Indexed as

ChickensComplementarity Determining RegionsAmino AcidsAnimalsAntibodiesAntibody DiversityGenes, ImmunoglobulinHumansMammalsAmino AcidsAntibodiesComplementarity Determining Regionsamino acidavianB celldiversityhumanimmunoglobulin

Identifiers

PMID36569888
PMCPMC9772431
OpenAlexW4311849793

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.