Evidence map›Paper›PMID 36569545›Full record

ArticlePatterns (New York, N.Y.)2022

An AI-assisted tool for efficient prostate cancer diagnosis in low-grade and low-volume cases.

Mustafa Umit Oner, Mei Ying Ng, Danilo Medina Giron, Cecilia Ee Chen Xi, Louis Ang Yuan Xiang, Malay Singh, Weimiao Yu, Wing-Kin Sung, Chin Fong Wong, Hwee Kuan Lee

Open access · goldAbstract read
In one paragraph

Article in Patterns (New York, N.Y.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.9field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Mustafa Umit OnerBioinformatics Institute, Agency for Science, Technology and Research (A∗STAR), Singapore 138671, Singapore.
Mei Ying NgBioinformatics Institute, Agency for Science, Technology and Research (A∗STAR), Singapore 138671, Singapore.
Danilo Medina GironDepartment of Pathology, Tan Tock Seng Hospital, Singapore 308433, Singapore.
Cecilia Ee Chen XiBioinformatics Institute, Agency for Science, Technology and Research (A∗STAR), Singapore 138671, Singapore.
Louis Ang Yuan XiangBioinformatics Institute, Agency for Science, Technology and Research (A∗STAR), Singapore 138671, Singapore.
Malay SinghBioinformatics Institute, Agency for Science, Technology and Research (A∗STAR), Singapore 138671, Singapore.
Weimiao YuBioinformatics Institute, Agency for Science, Technology and Research (A∗STAR), Singapore 138671, Singapore.
Wing-Kin SungSchool of Computing, National University of Singapore, Singapore 117417, Singapore.
Chin Fong WongDepartment of Pathology, Tan Tock Seng Hospital, Singapore 308433, Singapore.
Hwee Kuan LeeBioinformatics Institute, Agency for Science, Technology and Research (A∗STAR), Singapore 138671, Singapore.
Agency for Science, Technology and Research · SGTan Tock Seng Hospital · SG

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathologists diagnose prostate cancer by core needle biopsy. In low-grade and low-volume cases, they look for a few malignant glands out of hundreds within a core. They may miss a few malignant glands, resulting in repeat biopsies or missed therapeutic opportunities. This study developed a multi-resolution deep-learning pipeline to assist pathologists in detecting malignant glands in core needle biopsies of low-grade and low-volume cases. Analyzing a gland at multiple resolutions, our model exploited morphology and neighborhood information, which were crucial in prostate gland classification. We developed and tested our pipeline on the slides of a local cohort of 99 patients in Singapore. Besides, we made the images publicly available, becoming the first digital histopathology dataset of patients of Asian ancestry with prostatic carcinoma. Our multi-resolution classification model achieved an area under the receiver operating characteristic curve (AUROC) value of 0.992 (95% confidence interval [CI]: 0.985-0.997) in the external validation study, showing the generalizability of our multi-resolution approach.

Indexed as

artificial intelligencecomputational pathologydeep learningdigital pathologyhistopathologymachine learningprostate cancerwhole slide image analysis

Identifiers

PMID36569545
PMCPMC9768677
OpenAlexW4311138018

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.