Evidence map›Paper›PMID 36569535›Full record

ArticleData in brief2023

Spinal cord RNA-seq data after a baclofen treatment in mice with a spinal cord injury.

Nidia de Sousa, Diego Robledo, Laura González-Llera, Andreia G Pinho, Diogo J Santos, Susana Monteiro, Jonas Campos, Jorge R Cibrão, Nuno A Silva, Laura Sánchez and 2 more

Open access · goldAbstract read
In one paragraph

Article in Data in brief, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 3 countries.

Nidia de SousaICVS/3B's Associate Lab, PT Government Associated Lab, Braga/Guimarães 4806-909, Portugal.
Diego RobledoThe Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, Midlothian EH25 9RG, UK.
Laura González-LleraDepartment of Functional Biology, Faculty of Biology, CIBUS, Universidade de Santiago de Compostela, Santiago de Compostela 15782, Spain.
Andreia G PinhoICVS/3B's Associate Lab, PT Government Associated Lab, Braga/Guimarães 4806-909, Portugal.
Diogo J SantosICVS/3B's Associate Lab, PT Government Associated Lab, Braga/Guimarães 4806-909, Portugal.
Susana MonteiroICVS/3B's Associate Lab, PT Government Associated Lab, Braga/Guimarães 4806-909, Portugal.
Jonas CamposICVS/3B's Associate Lab, PT Government Associated Lab, Braga/Guimarães 4806-909, Portugal.
Jorge R CibrãoICVS/3B's Associate Lab, PT Government Associated Lab, Braga/Guimarães 4806-909, Portugal.
Nuno A SilvaICVS/3B's Associate Lab, PT Government Associated Lab, Braga/Guimarães 4806-909, Portugal.
Laura SánchezDepartment of Zoology, Genetics and Physical Anthropology, Faculty of Veterinary Science, Universidade de Santiago de Compostela, Lugo 27002, Spain.
António J SalgadoICVS/3B's Associate Lab, PT Government Associated Lab, Braga/Guimarães 4806-909, Portugal.
Antón Barreiro-IglesiasDepartment of Functional Biology, Faculty of Biology, CIBUS, Universidade de Santiago de Compostela, Santiago de Compostela 15782, Spain.
University of Minho · PTUniversidade de Santiago de Compostela · ESRoslin Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spinal cord injury (SCI) leads to severe functional deficits. Currently, there are no available pharmacological treatments to promote neurological recovery in SCI patients. Recent work from our group has shown that a baclofen treatment can promote functional recovery after a compression SCI in mice [1]. Here, we provide transcriptomic (RNA-seq) data from adult mouse spinal cords collected 7 days after a compression SCI and baclofen (vs vehicle) administration. The Illumina NovaSeq 6000 platform was used to generate the raw transcriptomic data. In addition, we also present bioinformatic analyses including differential gene expression analysis, enrichment analyses for various functional annotations (gene ontology, KEGG and BioCarta pathways or InterPro domains) and transcription factor targets. The raw RNA-seq data has been uploaded to the NCBI Sequence Read Archive (SRA) database (Bioproject ID PRJNA886048). The data generated from the bioinformatic analyses is contained within the article.

Indexed as

BaclofenNeuroprotectionRegenerationRNA-seqSpinal cord injuryTraumatic nervous system injury

Identifiers

PMID36569535
PMCPMC9772790
OpenAlexW4312211677

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.