Evidence map›Paper›PMID 36568369›Full record

ArticleFrontiers in genetics2022

GWAS analysis to elucidate genetic composition underlying a photoperiod-insensitive rice population, North Korea.

Chuluuntsetseg Jadamba, Richie L Vea, Jung-Hoon Ryu, Nam-Chon Paek, Su Jang, Joong Hyoun Chin, Soo-Cheul Yoo

Erratum issuedOpen access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Frontiers in genetics, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Chuluuntsetseg JadambaCrop Molecular Breeding Laboratory, Department of Plant Life and Environmental Science, Hankyong National University, Anseong, South Korea.
Richie L VeaBureau of Plant Industry, National Seed Quality Control Services, San Mateo, Isabela Philippines.
Jung-Hoon RyuCrop Molecular Breeding Laboratory, Department of Plant Life and Environmental Science, Hankyong National University, Anseong, South Korea.
Nam-Chon PaekDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, South Korea.
Su JangDepartment of Plant Science, Plant Genomics and Breeding Institute, Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, South Korea.
Joong Hyoun ChinDepartment of Integrative Biological Sciences and Industry, Sejong University, Seoul, South Korea.
Soo-Cheul YooCrop Molecular Breeding Laboratory, Department of Plant Life and Environmental Science, Hankyong National University, Anseong, South Korea.
Hankyong National University · KRSeoul National University · KRBureau of Plant Industry · PHSejong University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Heading date (Hd) is one of the main factors determining rice production and regional adaptation. To identify the genetic factors involved in the wide regional adaptability of rice, we conducted a genome-wide association study (GWAS) with 190 North Korean rice accessions selected for non-precocious flowering in the Philippines, a low-latitude region. Using both linear mixed models (LMM) and fixed and random model circulating probability unification (FarmCPU), we identified five significant loci for Hd in trials in 2018 and 2019. Among the five lead single nucleotide polymorphisms (SNPs), three were located adjacent to the known Hd genes, Heading date 3a (

Indexed as

GWAShaplotypingheading dateNorth Korean ricephotoperiod sensitivityregional adaptation

Identifiers

PMID36568369
PMCPMC9768348
OpenAlexW4311708212

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.