Evidence map›Paper›PMID 36564538›Full record

ArticleEuropean journal of human genetics : EJHG2023

Heterozygous and homozygous variants in STX1A cause a neurodevelopmental disorder with or without epilepsy.

Johannes Luppe, Heinrich Sticht, François Lecoquierre, Alice Goldenberg, Kathleen M Gorman, Ben Molloy, Emanuele Agolini, Antonio Novelli, Silvana Briuglia, Outi Kuismin and 7 more

Open access · hybridAbstract read
In one paragraph

Article in European journal of human genetics : EJHG, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

  1. Review
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  7. 2023 in the European Journal of Human Genetics.European journal of human genetics : EJHG · 2024
    Article
  8. A transporter's doom or destiny:Frontiers in molecular neuroscience · 2024
    Review
  9. Article
  10. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors at 9 institutions in 6 countries.

Johannes LuppeInstitute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.
Heinrich StichtInstitute of Biochemistry, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.ORCID http://orcid.org/0000-0001-5644-045X
François LecoquierreDepartment of Genetics and Reference Center for Developmental Disorders, Normandie Univ, UNIROUEN, CHU Rouen, Inserm U1245, FHU G4 Génomique, F-76000, Rouen, France.
Alice GoldenbergDepartment of Genetics and Reference Center for Developmental Disorders, Normandie Univ, UNIROUEN, CHU Rouen, Inserm U1245, FHU G4 Génomique, F-76000, Rouen, France.
Kathleen M GormanDepartment of Neurology and Clinical Neurophysiology, Children's Health Ireland at Temple Street, Dublin, Ireland.
Ben MolloyGenuity Science, Dublin, Ireland.
Emanuele AgoliniLaboratory of Medical Genetics, Bambino Gesù Children Hospital IRCCS, Rome, Italy.
Antonio NovelliLaboratory of Medical Genetics, Bambino Gesù Children Hospital IRCCS, Rome, Italy.
Silvana BriugliaDepartment of Biomedical, Dental, Morphological and Functional Imaging Sciences, University of Messina, Messina, Italy.
Outi KuisminInstitute for Molecular Medicine Finland, Helsinki, Finland.
Carlo MarcelisDepartment of Human Genetics, Radboud University Medical Center, Nijmegen, Netherlands.
Antonio VitobelloInserm UMR1231 GAD, University of Burgundy-Franche Comté, Dijon, France.ORCID http://orcid.org/0000-0003-3717-8374
Anne-Sophie Denommé-PichonInserm UMR1231 GAD, University of Burgundy-Franche Comté, Dijon, France.ORCID http://orcid.org/0000-0002-8986-8222
Sophie JuliaFederative Institute of Biology, CHU de Toulouse, Toulouse, France.
Johannes R LemkeInstitute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.ORCID http://orcid.org/0000-0002-4435-6610
Rami Abou JamraInstitute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany.ORCID http://orcid.org/0000-0002-1542-1399
Konrad PlatzerInstitute of Human Genetics, University of Leipzig Medical Center, Leipzig, Germany. konrad.platzer@medizin.uni-leipzig.de.ORCID http://orcid.org/0000-0001-6127-6308
Inserm · FRLeipzig University · DEBambino Gesù Children's Hospital · ITCentre Hospitalier Universitaire de Toulouse · FRFriedrich-Alexander-Universität Erlangen-Nürnberg · DEInstitute for Molecular Medicine Finland · FIRadboud University Nijmegen · NLUniversity College Dublin · IEUniversity of Messina · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The neuronal SNARE complex drives synaptic vesicle exocytosis. Therefore, one of its core proteins syntaxin 1A (STX1A) has long been suspected to play a role in neurodevelopmental disorders. We assembled eight individuals harboring ultra rare variants in STX1A who present with a spectrum of intellectual disability, autism and epilepsy. Causative variants comprise a homozygous splice variant, three de novo missense variants and two inframe deletions of a single amino acid. We observed a phenotype mainly driven by epilepsy in the individuals with missense variants in contrast to intellectual disability and autistic behavior in individuals with single amino acid deletions and the splicing variant. In silico modeling of missense variants and single amino acid deletions show different impaired protein-protein interactions. We hypothesize the two phenotypic courses of affected individuals to be dependent on two different pathogenic mechanisms: (1) a weakened inhibitory STX1A-STXBP1 interaction due to missense variants results in an STX1A-related developmental epileptic encephalopathy and (2) a hampered SNARE complex formation due to inframe deletions causes an STX1A-related intellectual disability and autism phenotype. Our description of a STX1A-related neurodevelopmental disorder with or without epilepsy thus expands the group of rare diseases called SNAREopathies.

Indexed as

Autistic DisorderEpilepsyIntellectual DisabilityNeurodevelopmental DisordersHeterozygoteHumansPhenotypeSyntaxin 1Syntaxin 1

Identifiers

PMID36564538
PMCPMC9995539
OpenAlexW4312129198

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.