Evidence map›Paper›PMID 36563748›Full record

ArticleThe American journal of pathology2023

Detection of Colorectal Adenocarcinoma and Grading Dysplasia on Histopathologic Slides Using Deep Learning.

Junhwi Kim, Naofumi Tomita, Arief A Suriawinata, Saeed Hassanpour

Open access · greenAbstract read
In one paragraph

Article in The American journal of pathology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
2.3field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Junhwi KimDepartment of Computer Science, Dartmouth College, Hanover, New Hampshire.
Naofumi TomitaDepartment of Biomedical Data Science, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire.
Arief A SuriawinataDepartment of Pathology and Laboratory Medicine, Dartmouth-Hitchcock Medical Center, Lebanon, New Hampshire.
Saeed HassanpourDepartment of Computer Science, Dartmouth College, Hanover, New Hampshire; Department of Biomedical Data Science, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire; Department of Epidemiology, Geisel School of Medicine at Dartmouth, Hanover, New Hampshire. Electronic address: saeed.hassanpour@dartmouth.edu.
Dartmouth College · USDartmouth–Hitchcock Medical Center · US

Funding

Advancing Digital Pathology through Novel Machine Learning MethodologiesR01LM013833 · NLM · DARTMOUTH COLLEGE · PI Saeed Hassanpour · 2022 to 2026
$3.0M
Clinicopathologic and Genetic Profiling through Machine Learning and Natural Language Processing for Precision Lung Cancer ManagementR01CA249758 · NCI · DARTMOUTH COLLEGE · PI HASSANPOUR, SAEED · 2019 to 2022
$1.5M
Improving Colorectal Cancer Screening and Risk Assessment through Deep Learning on Medical Images and RecordsR01LM012837 · NLM · DARTMOUTH COLLEGE · PI HASSANPOUR, SAEED · 2019 to 2022
$1.4M
NCI NIH HHS R01 CA249758NLM NIH HHS R01 LM012837NLM NIH HHS R01 LM013833
6 · The paper itself

Abstract

Colorectal cancer (CRC) is one of the most common types of cancer among men and women. The grading of dysplasia and the detection of adenocarcinoma are important clinical tasks in the diagnosis of CRC and shape the patients' follow-up plans. This study evaluated the feasibility of deep learning models for the classification of colorectal lesions into four classes: benign, low-grade dysplasia, high-grade dysplasia, and adenocarcinoma. To this end, a deep neural network was developed on a training set of 655 whole slide images of digitized colorectal resection slides from a tertiary medical institution; and the network was evaluated on an internal test set of 234 slides, as well as on an external test set of 606 adenocarcinoma slides from The Cancer Genome Atlas database. The model achieved an overall accuracy, sensitivity, and specificity of 95.5%, 91.0%, and 97.1%, respectively, on the internal test set, and an accuracy and sensitivity of 98.5% for adenocarcinoma detection task on the external test set. Results suggest that such deep learning models can potentially assist pathologists in grading colorectal dysplasia, detecting adenocarcinoma, prescreening, and prioritizing the reviewing of suspicious cases to improve the turnaround time for patients with a high risk of CRC. Furthermore, the high sensitivity on the external test set suggests the model's generalizability in detecting colorectal adenocarcinoma on whole slide images across different institutions.

Indexed as

AdenocarcinomaColorectal NeoplasmsDeep LearningFemaleHumansHyperplasiaMaleNeural Networks, ComputerPathologists

Identifiers

PMID36563748
PMCPMC10012966
OpenAlexW4312105424

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.