Evidence map›Paper›PMID 36562243›Full record

ArticleNeuro-oncology2023

Deep learning based on preoperative magnetic resonance (MR) images improves the predictive power of survival models in primary spinal cord astrocytomas.

Ting Sun, Yongzhi Wang, Xing Liu, Zhaohui Li, Jie Zhang, Jing Lu, Liying Qu, Sven Haller, Yunyun Duan, Zhizheng Zhuo and 4 more

Abstract read
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Article in Neuro-oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

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0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Ting SunDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Yongzhi WangDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Xing LiuDepartment of Pathology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Zhaohui LiDepartment of Machine learning, BioMind Inc., Beijing, 100070, China.
Jie ZhangDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Jing LuDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Liying QuDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Sven HallerDepartment of Imaging and Medical Informatics, University Hospitals of Geneva and Faculty of Medicine of the University of Geneva, Geneva, Switzerland.
Yunyun DuanDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Zhizheng ZhuoDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Dan ChengDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Xiaolu XuDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Wenqing JiaDepartment of Neurosurgery, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.
Yaou LiuDepartment of Radiology, Beijing Tiantan Hospital, Capital Medical University, Beijing 100070, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrognostic models for spinal cord astrocytoma patients are lacking due to the low incidence of the disease. Here, we aim to develop a fully automated deep learning (DL) pipeline for stratified overall survival (OS) prediction based on preoperative MR images.

methodsA total of 587 patients diagnosed with intramedullary tumors were retrospectively enrolled in our hospital to develop an automated pipeline for tumor segmentation and OS prediction. The automated pipeline included a T2WI-based tumor segmentation model and 3 cascaded binary OS prediction models (1-year, 3-year, and 5-year models). For the tumor segmentation model, 439 cases of intramedullary tumors were used to model training and testing using a transfer learning strategy. A total of 138 patients diagnosed with astrocytomas were included to train and test the OS prediction models via 10 × 10-fold cross-validation using CNNs.

resultsThe dice of the tumor segmentation model with the test set was 0.852. The results indicated that the best input of OS prediction models was a combination of T2W and T1C images and the tumor mask. The 1-year, 3-year, and 5-year automated OS prediction models achieved accuracies of 86.0%, 84.0%, and 88.0% and AUCs of 0.881 (95% CI 0.839-0.918), 0.862 (95% CI 0.827-0.901), and 0.905 (95% CI 0.867-0.942), respectively. The automated DL pipeline achieved 4-class OS prediction (<1 year, 1-3 years, 3-5 years, and >5 years) with 75.3% accuracy.

conclusionsWe proposed an automated DL pipeline for segmenting spinal cord astrocytomas and stratifying OS based on preoperative MR images.

Indexed as

AstrocytomaDeep LearningSpinal Cord NeoplasmsHumansMagnetic Resonance ImagingMagnetic Resonance SpectroscopyRetrospective Studiesdeep learningoverall survivalpredictionspinal cord astrocytomas

Identifiers

PMID36562243
PMCPMC10237430

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