Evidence map›Paper›PMID 36561348›Full record

ArticleJournal of circadian rhythms2022

Discovery and Visualization of Age-Dependent Patterns in the Diurnal Transcriptome of Drosophila.

Benjamin Sebastian, Rosalyn M Fey, Patrick Morar, Brittany Lasher, Jadwiga M Giebultowicz, David A Hendrix

Open access · goldAbstract read
In one paragraph

Article in Journal of circadian rhythms, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.3field-weighted citation impact, top 48% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Benjamin Sebastian *Department of Mathematics, Oregon State University, US.
Rosalyn M Fey *Department of Biochemistry and Biophysics, Oregon State University, US.ORCID https://orcid.org/0000-0002-3202-1012
Patrick MorarDepartment of Biochemistry and Biophysics, Oregon State University, US.
Brittany LasherDepartment of Biochemistry and Biophysics, Oregon State University, US.ORCID https://orcid.org/0000-0003-2650-4162
Jadwiga M GiebultowiczDepartment of Integrative Biology, Oregon State University, US.ORCID https://orcid.org/0000-0003-1540-449X
David A HendrixDepartment of Biochemistry and Biophysics, Oregon State University, US.ORCID https://orcid.org/0000-0002-7285-1977
Oregon State University · US

Funding

Understanding the Gene Regulatory Mechanisms That Underlie Age-Induced Changes in the Circadian System and NeurodegenerationR01AG061406 · NIA · OREGON STATE UNIVERSITY · PI HENDRIX, DAVID ANTHONY · 2018 to 2022
$1.8M
NIA NIH HHS R01 AG061406
6 · The paper itself

Abstract

Many critical life processes are regulated by input from 24-hour external light/dark cycles, such as metabolism, cellular homeostasis, and detoxification. The circadian clock, which helps coordinate the response to these diurnal light/dark cycles, remains rhythmic across lifespan; however, rhythmic transcript expression is altered during normal aging. To better understand how aging impacts diurnal expression, we present an improved Fourier-based method for detecting and visualizing rhythmicity that is based on the relative power of the 24-hour period compared to other periods (RP24). We apply RP24 to transcript-level expression profiles from the heads of young (5-day) and old (55-day)

Indexed as

aging, Drosophilacircadian rhythmdiurnal expressionFourier spectrumtranscriptomics

Identifiers

PMID36561348
PMCPMC9733130
OpenAlexW4311867703

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.