Evidence map›Paper›PMID 36560962›Full record

ArticleBioMed research international2022

Prognostic Signature for Human Umbilical Cord Mesenchymal Stem Cell Treatment of Ischemic Cerebral Infarction by Integrated Bioinformatic Analysis.

Zhifeng Wen, Fangxi Liu, Xinyu Lin, Shanshan Zhong, Xiuchun Zhang, Zhike Zhou, Jukka Jolkkonen, Chang Liu, Chuansheng Zhao

Open access · hybridAbstract read
In one paragraph

Article in BioMed research international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.2field-weighted citation impact, top 49% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 2 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Zhifeng WenDepartment of Neurosurgery, The First Affiliated Hospital of China Medical University, Shenyang, Liaoning Province, China.
Fangxi LiuDepartment of Neurology, The First Hospital of China Medical University, Shenyang, Liaoning Province, China.
Xinyu LinDepartment of Neurology, The First Hospital of China Medical University, Shenyang, Liaoning Province, China.
Shanshan ZhongDepartment of Neurology, The First Hospital of China Medical University, Shenyang, Liaoning Province, China.
Xiuchun ZhangDepartment of Neurology, The First Hospital of China Medical University, Shenyang, Liaoning Province, China.
Zhike ZhouDepartment of Geriatrics, The First Affiliated Hospital, China Medical University, Shenyang, China.ORCID https://orcid.org/0000-0002-3571-8130
Jukka JolkkonenA.I. Virtanen Institute and Institute of Clinical Medicine/Neurology, University of Eastern Finland, Finland.
Chang LiuDepartment of Neurology, The First Hospital of China Medical University, Shenyang, Liaoning Province, China.ORCID https://orcid.org/0000-0003-0776-6984
Chuansheng ZhaoDepartment of Neurology, The First Hospital of China Medical University, Shenyang, Liaoning Province, China.ORCID https://orcid.org/0000-0002-4100-1259
First Hospital of China Medical University · CNChina Medical University · CNUniversity of Eastern Finland · FI

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent studies, stem cell-based therapy is a potential new approach in the treatment of stroke. The mechanism of human umbilical cord mesenchymal stem cell (hUMSC) transplantation as one of the new approaches in the treatment of ischemic stroke is still unclear. The aim of this study was to determine the traits of immune responses during stroke progression after treatment with human umbilical cord blood MSCs by bioinformatics, to predict potential prognostic biomarkers that could lead to sex differences, and to reveal potential therapeutic targets. The microarray dataset GSE78731 (mRNA profile) of middle cerebral artery occlusion (MCAO) rats was obtained from the Gene Expression Omnibus (GEO) database. First, two potentially expressed genes (DEGs) were screened using the Bioconductor R package. Ultimately, 30 specific DEGs were obtained (22 upregulated and 353 downregulated). Next, bioinformatic analysis was performed on these specific DEGs. We performed a comparison for the differentially expressed genes screened from between the hUMSC and MCAO groups. Gene Ontology enrichment and pathway enrichment analyses were then performed for annotation and visualization. Gene Ontology (GO) functional annotation analysis shows that DEGs are mainly enriched in leukocyte migration, neutrophil activation, neutrophil degranulation, the external side of plasma membrane, cytokine receptor binding, and carbohydrate binding. KEGG pathway enrichment analysis showed that the first 5 enrichment pathways were cytokine-cytokine receptor interaction, chemokine signal pathway, viral protein interaction with cytokine and cytokine receptor, cell adhesion molecules (CAMs), and phagosome. The top 10 key genes of the constructed PPI network were screened, including

Indexed as

Mesenchymal Stem CellsStrokeAnimalsComputational BiologyCytokinesFemaleGene Expression ProfilingGene OntologyHumansInfarction, Middle Cerebral ArteryMaleNADPH Oxidase 2PrognosisProtein Interaction MapsRatsCybb protein, ratCytokinesNADPH Oxidase 2

Identifiers

PMID36560962
PMCPMC9767723
OpenAlexW4311301281

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.