Evidence map›Paper›PMID 36560866›Full record

ArticleG3 (Bethesda, Md.)2023

A novel narnavirus is widespread in Saccharomyces cerevisiae and impacts multiple host phenotypes.

Sriram Vijayraghavan, Stanislav G Kozmin, Wen Xi, John H McCusker

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 8 citations in OpenAlex.

  1. Review
  2. Core gene set of the speciesbioRxiv : the preprint server for biology · 2025
    Article
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  4. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Sriram VijayraghavanDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, 561 Research Drive 3020, Jones Bldg. Room 239, Durham, NC 27710, USA.
Stanislav G KozminDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, 561 Research Drive 3020, Jones Bldg. Room 239, Durham, NC 27710, USA.
Wen XiDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, 561 Research Drive 3020, Jones Bldg. Room 239, Durham, NC 27710, USA.
John H McCuskerDepartment of Molecular Genetics and Microbiology, Duke University Medical Center, 561 Research Drive 3020, Jones Bldg. Room 239, Durham, NC 27710, USA.ORCID 0000-0002-8803-9131
Duke University · US

Funding

Nuclear, mitochondrial and L-A virus contributions to yeast quantitative traitsR01GM118936 · NIGMS · DUKE UNIVERSITY · PI MCCUSKER, JOHN H. · 2017 to 2020
$1.6M
NIGMS NIH HHS R01 GM118936
6 · The paper itself

Abstract

RNA viruses are a widespread, biologically diverse group that includes the narnaviridiae, a family of unencapsidated RNA viruses containing a single ORF that encodes an RNA-dependent RNA polymerase. In the yeast Saccharomyces cerevisiae, the 20S and 23S RNA viruses are well-studied members of the narnaviridiae, which are present at low intracellular copy numbers, unless induced by stress or unfavorable growth conditions, and are not known to affect host fitness. In this study, we describe a new S. cerevisiae narnavirus that we designate as N1199. We show that N1199 is uniquely present as a double-stranded RNA at a high level relative to other known members of this family in 1 strain background, YJM1199, and is present as a single-stranded RNA at lower levels in 98 of the remaining 100-genomes strains. Furthermore, we see a strong association between the presence of high level N1199 and host phenotype defects, including greatly reduced sporulation efficiency and growth on multiple carbon sources. Finally, we describe associations between N1199 abundance and host phenotype defects, including autophagy.

Indexed as

RNA VirusesSaccharomyces cerevisiaePhenotypeRNA, Double-StrandedRNA, Double-Stranded100-genomes strainsautophagynarnavirusRas/PKARNA virusesSaccharomyces cerevisiae

Identifiers

PMID36560866
PMCPMC9911063
OpenAlexW4312113763

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.